(Q33988569)

English

Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp

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scholarly article

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11713301%20AND%20SRC:MED&resulttype=core&format=json

3 December 2019

Box C/D RNA guides for the ribose methylation of archaeal tRNAs. The tRNATrp intron guides the formation of two ribose-methylated nucleosides in the mature tRNATrp (English)

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11713301%20AND%20SRC:MED&resulttype=core&format=json

3 December 2019

Béatrice Clouet-d'Orval

1

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3 December 2019

author name string

M L Bortolin

2

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3 December 2019

C Gaspin

3

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3 December 2019

J P Bachellerie

4

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3 December 2019

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1 November 2001

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3 December 2019

Nucleic Acids Research

1 reference

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3 December 2019

29

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3 December 2019

4518-4529

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3 December 2019

22

1 reference

Europe PubMed Central

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3 December 2019

RNomics: an experimental approach that identifies 201 candidates for novel, small, non-messenger RNAs in mouse

1 reference

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5 July 2018

A guided tour: small RNA function in Archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

A novel brain-specific box C/D small nucleolar RNA processed from tandemly repeated introns of a noncoding RNA gene in rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Identification of brain-specific and imprinted small nucleolar RNA genes exhibiting an unusual genomic organization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

A common core RNP structure shared between the small nucleoar box C/D RNPs and the spliceosomal U4 snRNP

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Junction phosphate is derived from the precursor in the tRNA spliced by the archaeon Haloferax volcanii cell extract

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Homologs of small nucleolar RNAs in Archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Characterisation of the U83 and U84 small nucleolar RNAs: two novel 2'-O-ribose methylation guide RNAs that lack complementarities to ribosomal RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Nucleolar factors direct the 2'-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

A computational screen for methylation guide snoRNAs in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Transfer RNA modification enzymes from Pyrococcus furiosus: detection of the enzymatic activities in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Modification of U6 spliceosomal RNA is guided by other small RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Nop5p is a small nucleolar ribonucleoprotein component required for pre-18 S rRNA processing in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Posttranscriptional modifications in 16S and 23S rRNAs of the archaeal hyperthermophile Sulfolobus solfataricus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Sequence and structural elements of methylation guide snoRNAs essential for site-specific ribose methylation of pre-rRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Compilation of tRNA sequences and sequences of tRNA genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Archaeal introns: splicing, intercellular mobility and evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Intron-dependent enzymatic formation of modified nucleosides in eukaryotic tRNAs: a review

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Guiding ribose methylation of rRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Pleiotropic effects of intron removal on base modification pattern of yeast tRNAPhe: an in vitro study.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Sno storm in the nucleolus: new roles for myriad small RNPs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Evolutionary divergence and salinity-mediated selection in halophilic archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Intron-encoded, antisense small nucleolar RNAs: the characterization of nine novel species points to their direct role as guides for the 2'-O-ribose methylation of rRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Palingol: a declarative programming language to describe nucleic acids' secondary structures and to scan sequence database.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Fibrillarin-like proteins occur in the domain Archaea

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Intron-dependent formation of pseudouridines in the anticodon of Saccharomyces cerevisiae minor tRNA(Ile).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Antisense snoRNAs: a family of nucleolar RNAs with long complementarities to rRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Effect of intron mutations on processing and function of Saccharomyces cerevisiae SUP53 tRNA in vitro and in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

A tRNA(Trp) intron endonuclease from Halobacterium volcanii. Unique substrate recognition properties

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

The numerous modified nucleotides in eukaryotic ribosomal RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

mRNA-type introns in U6 small nuclear RNA genes: implications for the catalysis in pre-mRNA splicing.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

2'-O-Methylated oligonucleotides in ribosomal 18S and 28S RNA of a mouse hepatoma, MH 134

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

5 July 2018

Birth of the snoRNPs: the evolution of the modification-guide snoRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

29 October 2018

RNA splicing ligase activity in the archaeon Haloferax volcanii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

29 October 2018

Halobacterium volcanii tRNAs. Identification of 41 tRNAs covering all amino acids, and the sequences of 33 class I tRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=92551

29 October 2018

Origin of splice junction phosphate in tRNAs processed by HeLa cell extract

1 reference

https://pubmed.ncbi.nlm.nih.gov/11713301

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The yeast tRNATyr gene intron is essential for correct modification of its tRNA product

1 reference

https://pubmed.ncbi.nlm.nih.gov/11713301

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Novel splicing mechanism for the ribosomal RNA intron in the archaebacterium Desulfurococcus mobilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/11713301

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

In vivo processing of an intron-containing archael tRNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/11713301

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mobilities of modified ribonucleotides on two-dimensional cellulose thin-layer chromatography

1 reference

https://pubmed.ncbi.nlm.nih.gov/11713301

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Splicing of intron-containing tRNATrp by the archaeon Haloferax volcanii occurs independent of mature tRNA structure

1 reference

https://pubmed.ncbi.nlm.nih.gov/11713301

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/29.22.4518

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11713301%20AND%20SRC:MED&resulttype=core&format=json

3 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11713301%20AND%20SRC:MED&resulttype=core&format=json

3 December 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11713301%20AND%20SRC:MED&resulttype=core&format=json

3 December 2019

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