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The nucleotide excision repair protein UvrB, a helicase-like enzyme with a catch.
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Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
review article
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title
The nucleotide excision repair protein UvrB, a helicase-like enzyme with a catch
(English)
1 reference
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Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
author
Caroline Kisker
series ordinal
6
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Europe PubMed Central
PubMed publication ID
10946234
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
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K Theis
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1
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Europe PubMed Central
PubMed publication ID
10946234
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
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9 November 2019
M Skorvaga
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2
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Europe PubMed Central
PubMed publication ID
10946234
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
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9 November 2019
M Machius
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3
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PubMed publication ID
10946234
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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
N Nakagawa
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4
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Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
B Van Houten
series ordinal
5
1 reference
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Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
language of work or name
English
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publication date
1 August 2000
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
published in
Mutation Research
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Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
volume
460
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stated in
Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
issue
3-4
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
page(s)
277-300
1 reference
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Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
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THE DISAPPEARANCE OF THYMINE DIMERS FROM DNA: AN ERROR-CORRECTING MECHANISM
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7 January 2021
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RELEASE OF ULTRAVIOLET LIGHT-INDUCED THYMINE DIMERS FROM DNA IN E. COLI K-12.
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The location of genes controlling radiation sensitivity in Escherichia coli
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A novel repair enzyme: UVRABC excision nuclease of Escherichia coli cuts a DNA strand on both sides of the damaged region
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Crossref
reference URL
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7 January 2021
based on heuristic
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The (A)BC excinuclease of Escherichia coli has only the UvrB and UvrC subunits in the incision complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
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Catalytic sites for 3' and 5' incision of Escherichia coli nucleotide excision repair are both located in UvrC
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
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Involvement of helicase II (uvrD gene product) and DNA polymerase I in excision mediated by the uvrABC protein complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Effect of DNA polymerase I and DNA helicase II on the turnover rate of UvrABC excision nuclease
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Molecular mechanism of transcription-repair coupling.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
UvrAB activity at a damaged DNA site: is unpaired DNA present?
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Helicase properties of the Escherichia coli UvrAB protein complex
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mutations in the Escherichia coli UvrB ATPase motif compromise excision repair capacity
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structure of the DNA nucleotide excision repair enzyme UvrB from Thermus thermophilus
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structure of Thermus thermophilus HB8 UvrB protein, a key enzyme of nucleotide excision repair
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structure of UvrB, a DNA helicase adapted for nucleotide excision repair
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structure of Escherichia coli UvrB C-terminal domain, and a model for UvrB-uvrC interaction
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
DNA excision repair
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
NMR assignments and secondary structure of the UvrC binding domain of UvrB
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Two related superfamilies of putative helicases involved in replication, recombination, repair and expression of DNA and RNA genomes
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Dali: a network tool for protein structure comparison
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Crossref
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7 January 2021
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inferred from DOI database lookup
Hepatitis C virus NS3 RNA helicase domain with a bound oligonucleotide: the crystal structure provides insights into the mode of unwinding
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Crossref
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7 January 2021
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Major domain swiveling revealed by the crystal structures of complexes of E. coli Rep helicase bound to single-stranded DNA and ADP
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Crystal structures of complexes of PcrA DNA helicase with a DNA substrate indicate an inchworm mechanism
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Comparisons between the structures of HCV and Rep helicases reveal structural similarities between SF1 and SF2 super-families of helicases
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
Involvement of a cryptic ATPase activity of UvrB and its proteolysis product, UvrB* in DNA repair
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
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7 January 2021
based on heuristic
inferred from DOI database lookup
The limited strand-separating activity of the UvrAB protein complex and its role in the recognition of DNA damage
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Helicase motifs: the engine that powers DNA unwinding
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
ATPase activity of UvrB protein form Thermus thermophilus HB8 and its interaction with DNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Introduction of a tryptophan reporter group into the ATP binding motif of the Escherichia coli UvrB protein for the study of nucleotide binding and conformational dynamics
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
ATP-dependent partitioning of the DNA template into supercoiled domains by Escherichia coli UvrAB
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The topodynamics of incision of UV-irradiated covalently closed DNA by the Escherichia coli Uvr(A)BC endonuclease
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Helicase motifs V and VI of the Escherichia coli UvrB protein of the UvrABC endonuclease are essential for the formation of the preincision complex.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The role of ATP binding and hydrolysis by UvrB during nucleotide excision repair
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Formation of DNA repair intermediates and incision by the ATP-dependent UvrB-UvrC endonuclease.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The effect of the DNA flanking the lesion on formation of the UvrB-DNA preincision complex. Mechanism for the UvrA-mediated loading of UvrB onto a DNA damaged site
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
DNA binding mediates conformational changes and metal ion coordination in the active site of PcrA helicase
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Structure and function of the UvrB protein
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The C-terminal region of the UvrB protein of Escherichia coli contains an important determinant for UvrC binding to the preincision complex but not the catalytic site for 3'-incision
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Function of the homologous regions of the Escherichia coli DNA excision repair proteins UvrB and UvrC in stabilization of the UvrBC-DNA complex and in 3'-incision
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Characterization of the Escherichia coli damage-independent UvrBC endonuclease activity
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Domain structure of Thermus thermophilus UvrB protein. Similarity in domain structure to a helicase.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Dimerization of Escherichia coli UvrA and its binding to undamaged and ultraviolet light damaged DNA
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The binding of UvrAB proteins to bubble and loop regions in duplex DNA.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Strand opening by the UvrA(2)B complex allows dynamic recognition of DNA damage
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
A specific 3' exonuclease activity of UvrABC.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The C-terminal region of the Escherichia coli UvrC protein, which is homologous to the C-terminal region of the human ERCC1 protein, is involved in DNA binding and 5'-incision
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: structural basis for damaged DNA recognition
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Action mechanism of ABC excision nuclease on a DNA substrate containing a psoralen crosslink at a defined position
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
ALSCRIPT: a tool to format multiple sequence alignments
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Mechanism of action of the Escherichia coli UvrABC nuclease: clues to the damage recognition problem
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Triple helix-directed psoralen crosslinks are recognized by Uvr(A)BC excinuclease
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0921-8777%2800%2900032-X
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1016/S0921-8777(00)00032-X
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
PubMed publication ID
10946234
1 reference
stated in
Europe PubMed Central
PubMed publication ID
10946234
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10946234%20AND%20SRC:MED&resulttype=core&format=json
retrieved
9 November 2019
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