(Q34026803)

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Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles

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scholarly article

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Europe PubMed Central

PubMed publication ID

30 July 2017

Characterization of transcriptome dynamics during watermelon fruit development: sequencing, assembly, annotation and gene expression profiles (English)

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Europe PubMed Central

PubMed publication ID

30 July 2017

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author name string

Shaogui Guo

1

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Europe PubMed Central

PubMed publication ID

30 July 2017

Jingan Liu

2

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Europe PubMed Central

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30 July 2017

Yi Zheng

3

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Europe PubMed Central

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30 July 2017

Mingyun Huang

4

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30 July 2017

Haiying Zhang

5

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Europe PubMed Central

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30 July 2017

Guoyi Gong

6

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30 July 2017

Hongju He

7

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Yi Ren

8

1 reference

Europe PubMed Central

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30 July 2017

Silin Zhong

9

1 reference

Europe PubMed Central

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30 July 2017

Zhangjun Fei

10

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30 July 2017

Yong Xu

11

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30 July 2017

language of work or name

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publication date

21 September 2011

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30 July 2017

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Europe PubMed Central

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30 July 2017

12

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Europe PubMed Central

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30 July 2017

454

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

https://scigraph.springernature.com/pub.10.1186/1471-2164-12-454

0 references

A consensus linkage map for molecular markers and quantitative trait loci associated with economically important traits in melon (Cucumis melo L.).

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Analysis of expressed sequence tags generated from full-length enriched cDNA libraries of melon.

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5 July 2018

Transcriptome characterization and high throughput SSRs and SNPs discovery in Cucurbita pepo (Cucurbitaceae)

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5 July 2018

Transcriptome sequencing and comparative analysis of cucumber flowers with different sex types

1 reference

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5 July 2018

Genome-wide identification, classification, and expression analysis of the arabinogalactan protein gene family in rice (Oryza sativa L.).

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5 July 2018

Sucrose accumulation in watermelon fruits: genetic variation and biochemical analysis

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5 July 2018

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5 July 2018

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5 July 2018

RNA-Seq: a revolutionary tool for transcriptomics

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5 July 2018

Gene expression in developing watermelon fruit

1 reference

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5 July 2018

A Barley xyloglucan xyloglucosyl transferase covalently links xyloglucan, cellulosic substrates, and (1,3;1,4)-beta-D-glucans

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5 July 2018

An early nodulin-like protein accumulates in the sieve element plasma membrane of Arabidopsis

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5 July 2018

Understanding SAGE data

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5 July 2018

Genes expressed during the development and ripening of watermelon fruit

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3197533

5 July 2018

Qualitative inheritance of rind pattern and flesh color in watermelon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3197533

5 July 2018

Metabolic regulation underlying tomato fruit development

1 reference

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5 July 2018

An Asian origin for a 10,000-year-old domesticated plant in the Americas

1 reference

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5 July 2018

Arabinogalactan proteins are required for apical cell extension in the moss Physcomitrella patens

1 reference

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5 July 2018

Comprehensive EST analysis of tomato and comparative genomics of fruit ripening

1 reference

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5 July 2018

GO::TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes

1 reference

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5 July 2018

Genetic regulation of fruit development and ripening

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3197533

5 July 2018

The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3197533

5 July 2018

The fasciclin-like arabinogalactan proteins of Arabidopsis. A multigene family of putative cell adhesion molecules

1 reference

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5 July 2018

The Pathway Tools software

1 reference

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5 July 2018

The comparison of gene expression from multiple cDNA libraries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3197533

5 July 2018

ESTScan: a program for detecting, evaluating, and reconstructing potential coding regions in EST sequences

1 reference

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5 July 2018

Characterization and expression of four proline-rich cell wall protein genes in Arabidopsis encoding two distinct subsets of multiple domain proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3197533

5 July 2018

Cloning and characterization of the cDNA for lycopene beta-cyclase from tomato reveals decrease in its expression during fruit ripening

1 reference

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Characterization of mRNA for a Proline-Rich Protein of Cotton Fiber

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5 July 2018

Lycopene as the most efficient biological carotenoid singlet oxygen quencher

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3197533

5 July 2018

Construction of a linkage map and QTL analysis of horticultural traits for watermelon [Citrullus lanatus (THUNB.) MATSUM & NAKAI] using RAPD, RFLP and ISSR markers

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-454

21 January 2018

A genetic map of melon highly enriched with fruit quality QTLs and EST markers, including sugar and carotenoid metabolism genes

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-454

21 January 2018

A cell wall protein down-regulated by auxin suppresses cell expansion in Daucus carota (L.).

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-12-454

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Xyloglucan endo-transglycosylase-mediated xyloglucan rearrangements in developing wood of hybrid aspen

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21 January 2018

Regulation by polyamines of ornithine decarboxylase activity and cell division in the unicellular green alga Chlamydomonas reinhardtii.

1 reference

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21 January 2018

Role of polyamines in peach fruit development and storage

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21 January 2018

Expression of polyamine biosynthesis genes during parthenocarpic fruit development in Citrus clementina.

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21 January 2018

Changes in transcriptional profiles are associated with early fruit tissue specialization in tomato

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21 January 2018

Gene and metabolite regulatory network analysis of early developing fruit tissues highlights new candidate genes for the control of tomato fruit composition and development

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21 January 2018

Novel insight into vascular, stress, and auxin-dependent and -independent gene expression programs in strawberry, a non-climacteric fruit.

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21 January 2018

Pyrobayes: an improved base caller for SNP discovery in pyrosequences.

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21 January 2018

DNA sequence quality trimming and vector removal.

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21 January 2018

Plant MetGenMAP: an integrative analysis system for plant systems biology

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21 January 2018

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The promoter of the Vicia faba L. gene VfEnod12 encoding an early nodulin is active in cortical cells and nodule primordia of transgenic hairy roots of Vicia hirsuta as well as in the prefixing zone II of mature transgenic V. hirsuta root nodules

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https://pubmed.ncbi.nlm.nih.gov/21936920

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Carotenoid Biosynthesis during Tomato Fruit Development (Evidence for Tissue-Specific Gene Expression)

1 reference

https://pubmed.ncbi.nlm.nih.gov/21936920

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Identifiers

10.1186/1471-2164-12-454

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Dimensions Publication ID

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

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