(Q34029485)

30 July 2017

title

How yeast re-programmes its transcriptional profile in response to different nutrient impulses (English)

1 reference

30 July 2017

Duygu Dikicioglu

1

1 reference

30 July 2017

Erkan Karabekmez

2

1 reference

30 July 2017

Bharat Rash

3

1 reference

30 July 2017

Pinar Pir

4

1 reference

30 July 2017

Betul Kirdar

5

1 reference

30 July 2017

Stephen G Oliver

6

1 reference

30 July 2017

publication date

25 September 2011

1 reference

30 July 2017

1 reference

30 July 2017

volume

5

1 reference

30 July 2017

page(s)

148

1 reference

Membrane Delivery to the Yeast Autophagosome from the Golgi–Endosomal System

30 July 2017

cites work

1 reference

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5 July 2018

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5 July 2018

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Transcription factor control of growth rate dependent genes in Saccharomyces cerevisiae: a three factor design

5 July 2018

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Widespread use of poly(A) tail length control to accentuate expression of the yeast transcriptome

5 July 2018

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5 July 2018

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Identification of functional modules using network topology and high-throughput data

5 July 2018

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Reconstructing dynamic regulatory maps

5 July 2018

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Identification of the proliferation/differentiation switch in the cellular network of multicellular organisms

5 July 2018

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When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation.

5 July 2018

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5 July 2018

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5 July 2018

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Transcriptional response of steady-state yeast cultures to transient perturbations in carbon source.

5 July 2018

1 reference

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5 July 2018

1 reference

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Profiling condition-specific, genome-wide regulation of mRNA stability in yeast

5 July 2018

1 reference

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Significance analysis of time course microarray experiments

5 July 2018

1 reference

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Transcriptional regulatory code of a eukaryotic genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Characterization of the calcium-mediated response to alkaline stress in Saccharomyces cerevisiae.

5 July 2018

1 reference

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Nutritional homeostasis in batch and steady-state culture of yeast

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

GeneCluster 2.0: an advanced toolset for bioarray analysis

5 July 2018

1 reference

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Glucose sensing and signaling in Saccharomyces cerevisiae through the Rgt2 glucose sensor and casein kinase I.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Multi-level response of the yeast genome to glucose

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Ammonia assimilation by Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Skp2 regulates Myc protein stability and activity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

5 July 2018

1 reference

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TRANSFAC: transcriptional regulation, from patterns to profiles

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Nitrogen regulation in Saccharomyces cerevisiae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

5 July 2018

1 reference

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Remodeling of yeast genome expression in response to environmental changes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

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5 July 2018

1 reference

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Genomic expression programs in the response of yeast cells to environmental changes

5 July 2018

1 reference

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Glucose metabolism in gcr mutants of Saccharomyces cerevisiae.

5 July 2018

1 reference

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Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation

5 July 2018

1 reference

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Regulators of pseudohyphal differentiation in Saccharomyces cerevisiae identified through multicopy suppressor analysis in ammonium permease mutant strains

5 July 2018

1 reference

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Aut2p and Aut7p, two novel microtubule-associated proteins are essential for delivery of autophagic vesicles to the vacuole

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Yeast carbon catabolite repression

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Suitability of replacement markers for functional analysis studies in Saccharomyces cerevisiae.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

The CCAAT box-binding factor stimulates ammonium assimilation in Saccharomyces cerevisiae, defining a new cross-pathway regulation between nitrogen and carbon metabolisms.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Heat shock response of Saccharomyces cerevisiae mutants altered in cyclic AMP-dependent protein phosphorylation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Identification and characterization of HAP4: a third component of the CCAAT-bound HAP2/HAP3 heteromer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Repression of nitrogen catabolic genes by ammonia and glutamine in nitrogen-limited continuous cultures of Saccharomyces cerevisiae

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-148

Doxycycline, the drug used to control the tet-regulatable promoter system, has no effect on global gene expression in Saccharomyces cerevisiae

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1752-0509-5-148

The optimal discovery procedure for large-scale significance testing, with applications to comparative microarray experiments

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Context-dependent codon bias and messenger RNA longevity in the yeast transcriptome.

29 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3224505

Glucose repression in Saccharomyces cerevisiae is related to the glucose concentration rather than the glucose flux

29 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21943358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Mth1 receives the signal given by the glucose sensors Snf3 and Rgt2 in Saccharomyces cerevisiae

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21943358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Hybridization array technology coupled with chemostat culture: Tools to interrogate gene expression in Saccharomyces cerevisiae

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21943358

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1752-0509-5-148

1 reference

journals/bmcsb/DikiciogluKRPKO11

30 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

30 July 2017

1 reference