(Q34037139)

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A -1 ribosomal frameshift element that requires base pairing across four kilobases suggests a mechanism of regulating ribosome and replicase traffic on a viral RNA

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scholarly article

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Europe PubMed Central

PubMed publication ID

30 July 2017

A -1 ribosomal frameshift element that requires base pairing across four kilobases suggests a mechanism of regulating ribosome and replicase traffic on a viral RNA (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

author name string

Jennifer K Barry

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

W Allen Miller

2

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

language of work or name

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publication date

30 July 2002

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Proceedings of the National Academy of Sciences of the United States of America

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

99

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

17

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

11133-11138

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

describes a project that uses

1 reference

Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC123222/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

The frameshift signal of HIV-1 involves a potential intramolecular triplex RNA structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

A positive-strand RNA virus replication complex parallels form and function of retrovirus capsids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

The path of messenger RNA through the ribosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

A sequence required for -1 ribosomal frameshifting located four kilobases downstream of the frameshift site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Poliovirus RNA replication requires genome circularization through a protein-protein bridge

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Decoding apparatus for eukaryotic selenocysteine insertion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Comparative mutational analysis of cis-acting RNA signals for translational frameshifting in HIV-1 and HTLV-2.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Structure and function of a cap-independent translation element that functions in either the 3' or the 5' untranslated region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

The case for the involvement of the Upf3p in programmed -1 ribosomal frameshifting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

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Gill-associated virus of Penaeus monodon prawns: an invertebrate virus with ORF1a and ORF1b genes related to arteri- and coronaviruses

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Structure, stability and function of RNA pseudoknots involved in stimulating ribosomal frameshifting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Kinetics of ribosomal pausing during programmed -1 translational frameshifting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

A long-range pseudoknot in Qbeta RNA is essential for replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Specific mutations in a viral RNA pseudoknot drastically change ribosomal frameshifting efficiency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Evidence for an RNA pseudoknot loop-helix interaction essential for efficient -1 ribosomal frameshifting.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Secondary structure and mutational analysis of the ribosomal frameshift signal of rous sarcoma virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Sequence element required for efficient -1 ribosomal frameshifting in red clover necrotic mosaic dianthovirus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Switch from translation to RNA replication in a positive-stranded RNA virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

A dual-luciferase reporter system for studying recoding signals

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

RNA replication by Q beta replicase: a working model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

A characteristic bent conformation of RNA pseudoknots promotes -1 frameshifting during translation of retroviral RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Local and distant sequences are required for efficient readthrough of the barley yellow dwarf virus PAV coat protein gene stop codon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Translational frameshifting by barley yellow dwarf virus RNA (PAV serotype) in Escherichia coli and in eukaryotic cell-free extracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

The sequences of and distance between two cis-acting signals determine the efficiency of ribosomal frameshifting in human immunodeficiency virus type 1 and human T-cell leukemia virus type II in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Genes and cis-acting sequences involved in replication of barley yellow dwarf virus-PAV RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Characterization of an efficient coronavirus ribosomal frameshifting signal: requirement for an RNA pseudoknot

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

An analysis of sequences stimulating frameshifting in the decoding of gene 10 of bacteriophage T7.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Ribosomal frameshifting requires a pseudoknot in the Saccharomyces cerevisiae double-stranded RNA virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Translational frameshifting mediated by a viral sequence in plant cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Human immunodeficiency virus type 1 gag-pol frameshifting is dependent on downstream mRNA secondary structure: demonstration by expression in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

28 July 2018

Recoding: dynamic reprogramming of translation.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Structure and function of the stimulatory RNAs involved in programmed eukaryotic-1 ribosomal frameshifting

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Ribosomal pausing at a frameshifter RNA pseudoknot is sensitive to reading phase but shows little correlation with frameshift efficiency

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Ribosomal protein L3 mutants alter translational fidelity and promote rapid loss of the yeast killer virus

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

The Mof2/Sui1 protein is a general monitor of translational accuracy

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

A long-range interaction in Qbeta RNA that bridges the thousand nucleotides between the M-site and the 3' end is required for replication

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Translation efficiency of the human T-cell leukemia virus (HTLV-2) gag gene modulates the frequency of ribosomal frameshifting

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

The structure of an RNA pseudoknot that causes efficient frameshifting in mouse mammary tumor virus

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Barley yellow dwarf virus RNA requires a cap-independent translation sequence because it lacks a 5' cap.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

The 3prime prime or minute-terminal structure required for replication of Barley yellow dwarf virus RNA contains an embedded 3prime prime or minute end.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.162223099

21 January 2018

Translating ribosomes inhibit poliovirus negative-strand RNA synthesis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=123222

29 October 2018

Programmed translational frameshifting

1 reference

https://pubmed.ncbi.nlm.nih.gov/12149516

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.162223099

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

2002PNAS...9911133B

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

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