(Q34061479)

English

A critical role for heat shock transcription factor in establishing a nucleosome-free region over the TATA-initiation site of the yeast HSP82 heat shock gene.

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11 October 2019

A critical role for heat shock transcription factor in establishing a nucleosome-free region over the TATA-initiation site of the yeast HSP82 heat shock gene (English)

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11 October 2019

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D S Gross

1

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11 October 2019

C C Adams

2

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11 October 2019

S Lee

3

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11 October 2019

B Stentz

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11 October 2019

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1 October 1993

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11 October 2019

The EMBO Journal

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11 October 2019

12

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11 October 2019

10

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11 October 2019

3931-3945

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11 October 2019

Multiple functions of nucleosomes and regulatory factors in transcription

1 reference

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(CT)n (GA)n repeats and heat shock elements have distinct roles in chromatin structure and transcriptional activation of the Drosophila hsp26 gene

1 reference

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5 July 2018

Nucleosome displacement in transcription

1 reference

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5 July 2018

Conditional silencing: the HMRE mating-type silencer exerts a rapidly reversible position effect on the yeast HSP82 heat shock gene

1 reference

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5 July 2018

Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA.

1 reference

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5 July 2018

Complete sequence of the heat shock-inducible HSP90 gene of Saccharomyces cerevisiae

1 reference

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5 July 2018

57 Sequencing end-labeled DNA with base-specific chemical cleavages

1 reference

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Induction of Galactokinase in Saccharomyces cerevisiae : Kinetics of Induction and Glucose Effects

1 reference

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5 July 2018

Rapid transfer of DNA from agarose gels to nylon membranes

1 reference

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5 July 2018

A hypersensitive site in hsp70 chromatin requires adjacent not internal DNA sequence.

1 reference

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5 July 2018

Naturally occurring poly(dA-dT) sequences are upstream promoter elements for constitutive transcription in yeast

1 reference

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5 July 2018

Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones

1 reference

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5 July 2018

Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements.

1 reference

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5 July 2018

Rapid and efficient site-specific mutagenesis without phenotypic selection

1 reference

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5 July 2018

A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli

1 reference

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5 July 2018

Saturation mutagenesis of a yeast his3 "TATA element": genetic evidence for a specific TATA-binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Key features of heat shock regulatory elements

1 reference

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5 July 2018

Germline transformation used to define key features of heat-shock response elements.

1 reference

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5 July 2018

RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Nucleosomes are phased along the mouse beta-major globin gene in erythroid and nonerythroid cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Constitutive binding of yeast heat shock factor to DNA in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Nuclease hypersensitive sites in chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Yeast heat shock factor is an essential DNA-binding protein that exhibits temperature-dependent phosphorylation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Protein/DNA architecture of the DNase I hypersensitive region of the Drosophila hsp26 promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Nucleosome loss activates yeast downstream promoters in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Specific glucocorticoid receptor binding to DNA reconstituted in a nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Sequence-specific positioning of nucleosomes over the steroid-inducible MMTV promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Artificial nucleosome positioning sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Drosophila nuclear proteins bind to regions of alternating C and T residues in gene promoters

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Basal-level expression of the yeast HSP82 gene requires a heat shock regulatory element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

hsp82 is an essential protein that is required in higher concentrations for growth of cells at higher temperatures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

A DNA binding protein that recognizes oligo(dA).oligo(dT) tracts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Positive and negative regulation of basal expression of a yeast HSP70 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Activation of yeast RNA polymerase II transcription by a thymidine-rich upstream element in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

A yeast ARS-binding protein activates transcription synergistically in combination with other weak activating factors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

A yeast protein that influences the chromatin structure of UASG and functions as a powerful auxiliary gene activator

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

An upstream transcription factor, USF (MLTF), facilitates the formation of preinitiation complexes during in vitro chromatin assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Histone function in transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Recombinant yeast TFIID, a general transcription factor, mediates activation by the gene-specific factor USF in a chromatin assembly assay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

The yeast heat shock transcription factor contains a transcriptional activation domain whose activity is repressed under nonshock conditions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Genomic footprinting of the yeast HSP82 promoter reveals marked distortion of the DNA helix and constitutive occupancy of heat shock and TATA elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Postinitiation transcriptional control in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

The structure of DNA in a nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Three tomato genes code for heat stress transcription factors with a region of remarkable homology to the DNA-binding domain of the yeast HSF

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Nucleosomes: regulators of transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Heat shock-regulated transcription in vitro from a reconstituted chromatin template

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Transcription-induced nucleosome 'splitting': an underlying structure for DNase I sensitive chromatin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Activation domains of stably bound GAL4 derivatives alleviate repression of promoters by nucleosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Heat shock-induced interactions of heat shock transcription factor and the human hsp70 promoter examined by in vivo footprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Irresistible force meets immovable object: transcription and the nucleosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

The yeast heat shock response is induced by conversion of cells to spheroplasts and by potent transcriptional inhibitors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Transactivation functions facilitate the disruption of chromatin structure by estrogen receptor derivatives in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Nucleosomes are positioned with base pair precision adjacent to the alpha 2 operator in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

RAP1 is required for BAS1/BAS2- and GCN4-dependent transcription of the yeast HIS4 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

A functional role for nucleosomes in the repression of a yeast promoter

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Isolation of a cDNA for HSF2: evidence for two heat shock factor genes in humans

1 reference

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5 July 2018

Molecular cloning and expression of a human heat shock factor, HSF1

1 reference

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5 July 2018

Transcription factor access is mediated by accurately positioned nucleosomes on the mouse mammary tumor virus promoter.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Chromatin as an essential part of the transcriptional mechanim

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Role of nucleosomal cores and histone H1 in regulation of transcription by RNA polymerase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Stable nucleosome positioning and complete repression by the yeast alpha 2 repressor are disrupted by amino-terminal mutations in histone H4.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Initiation on chromatin templates in a yeast RNA polymerase II transcription system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Mechanism of transcriptional antirepression by GAL4-VP16

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Nucleosome disruption at the yeast PHO5 promoter upon PHO5 induction occurs in the absence of DNA replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Uncoupling gene activity from chromatin structure: promoter mutations can inactivate transcription of the yeast HSP82 gene without eliminating nucleosome-free regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Promoter sequence containing (CT)n.(GA)n repeats is critical for the formation of the DNase I hypersensitive sites in the Drosophila hsp26 gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Yeast SNF/SWI transcriptional activators and the SPT/SIN chromatin connection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Kinetic analysis of deoxyribonuclease I cleavages in the nucleosome core: Evidence for a DNA superhelix

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

The induction of gene activity in drosophila by heat shock

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

5 July 2018

GAL4 disrupts a repressing nucleosome during activation of GAL1 transcription in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

28 October 2018

The 5' ends of Drosophila heat shock genes in chromatin are hypersensitive to DNase I.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

28 October 2018

Two protein-binding sites in chromatin implicated in the activation of heat-shock genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

28 October 2018

Induction of altered chromatin structures by simian virus 40 enhancer and promoter elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=413676

28 October 2018

Changes in histone gene dosage alter transcription in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Activation in vitro of sequence-specific DNA binding by a human regulatory factor

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The formation and function of DNase I hypersensitive sites in the process of gene activation

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A positive role for histone acetylation in transcription factor access to nucleosomal DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vacuum blotting: a simple method for transferring DNA from sequencing gels to nylon membranes

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Yeast heat shock factor contains separable transient and sustained response transcriptional activators

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mapping DNAase l-susceptible sites in nucleosomes labeled at the 5' ends

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Histone acetylation in baker's yeast. Maintenance of the hyperacetylated configuration in log phase protoplasts

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Negative control at a distance mediates catabolite repression in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sharp boundaries demarcate the chromatin structure of a yeast heat-shock gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Heat shock factor is regulated differently in yeast and HeLa cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Binding of transcription factor TFIID to the major late promoter during in vitro nucleosome assembly potentiates subsequent initiation by RNA polymerase II

1 reference

https://pubmed.ncbi.nlm.nih.gov/8404861

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1002/J.1460-2075.1993.TB06071.X

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8404861%20AND%20SRC:MED&resulttype=core&format=json

11 October 2019

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8404861%20AND%20SRC:MED&resulttype=core&format=json

11 October 2019

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:8404861%20AND%20SRC:MED&resulttype=core&format=json

11 October 2019

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