(Q34085863)

30 July 2017

title

Cellular pathways controlling integron cassette site folding. (English)

1 reference

30 July 2017

Céline Loot

1

1 reference

30 July 2017

David Bikard

series ordinal

2

1 reference

30 July 2017

Anna Rachlin

series ordinal

3

1 reference

30 July 2017

Didier Mazel

series ordinal

4

1 reference

30 July 2017

language of work or name

English

0 references

publication date

13 July 2010

1 reference

30 July 2017

1 reference

30 July 2017

volume

29

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30 July 2017

issue

15

1 reference

30 July 2017

page(s)

2623-2634

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The relaxed requirements of the integron cleavage site allow predictable changes in integron target specificity

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Structural features of single-stranded integron cassette attC sites and their role in strand selection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

The SOS response controls integron recombination.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Stationary phase mutagenesis in B. subtilis: a paradigm to study genetic diversity programs in cells under stress

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Growth rate toxicity phenotypes and homeostatic supercoil control differentiate Escherichia coli from Salmonella enterica serovar Typhimurium

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

DNA replication: keep moving and don't mind the gap.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Integrons: agents of bacterial evolution.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Integron cassette insertion: a recombination process involving a folded single strand substrate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Transposition of ISHp608, member of an unusual family of bacterial insertion sequences

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Discontinuous or semi-discontinuous DNA replication in Escherichia coli?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

A new family of mobilizable suicide plasmids based on broad host range R388 plasmid (IncW) and RP4 plasmid (IncPalpha) conjugative machineries and their cognate Escherichia coli host strains

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Plasmid rolling-circle replication: highlights of two decades of research

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Non-B DNA conformations, genomic rearrangements, and human disease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Mfold web server for nucleic acid folding and hybridization prediction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Uncoupling of leading- and lagging-strand DNA replication during lesion bypass in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Efficiency of recombination reactions catalyzed by class 1 integron integrase IntI1.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

The IntI1 integron integrase preferentially binds single-stranded DNA of the attC site

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

DNA structure and transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

A distinctive class of integron in the Vibrio cholerae genome.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Structure and function of 59-base element recombination sites associated with mobile gene cassettes

5 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

5 July 2018

https://api.crossref.org/works/10.1038%2FEMBOJ.2010.151

Isolation of a dnaE mutation which enhances RecA-independent homologous recombination in the Escherichia coli chromosome.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Inverted repeats, stem-loops, and cruciforms: significance for initiation of DNA replication

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Intrinsic termination of T7 RNA polymerase mediated by either RNA or DNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Copy-choice illegitimate DNA recombination revisited

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Long DNA palindromes, cruciform structures, genetic instability and secondary structure repair

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Mobile gene cassettes and integrons: capture and spread of genes by site-specific recombination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

The inverted repeat as a recognizable structural feature in supercoiled DNA molecules

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Regions of Single-Stranded DNA in the Growing Points of Replicating Bacteriophage T7 Chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Changes in the linking number of supercoiled DNA accompany growth transitions in Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Supercoiling of the DNA template during transcription

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Formation of supercoiling domains in plasmid pBR322.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Repair of the Escherichia coli chromosome after in vivo scission by the EcoRI endonuclease

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Initiation of rolling-circle replication in pT181 plasmid: initiator protein enhances cruciform extrusion at the origin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Torsionally tuned cruciform and Z-DNA probes for measuring unrestrained supercoiling at specific sites in DNA of living cells

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Site-specific insertion of genes into integrons: role of the 59-base element and determination of the recombination cross-over point

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

In vitro reconstitution of a single-stranded transposition mechanism of IS608.

5 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2010.151

SOS repair and DNA supercoiling influence the genetic stability of DNA triplet repeats in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2010.151

Increased negative superhelical density in vivo enhances the genetic instability of triplet repeat sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2010.151

Translocation by the RecB motor is an absolute requirement for {chi}-recognition and RecA protein loading by RecBCD enzyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2010.151

Structural basis for broad DNA-specificity in integron recombination

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2928681

Cruciform structures in supercoiled DNA

28 October 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2010.151

A topological model for transcription based on unwinding angle analysis of E. coli RNA polymerase binary, initiation and ternary complexes

21 January 2018

1 reference

12 December 2020

Analysis of altered DNA structures: cruciform DNA

1 reference

12 December 2020

Relationship between superhelical density and cruciform formation in plasmid pVH51

1 reference

12 December 2020

Topoisomerase mutants and physiological conditions control supercoiling and Z-DNA formation in vivo

1 reference

12 December 2020

New cloning vectors with temperature-sensitive replication

1 reference

12 December 2020

The Single-Stranded Genome of Phage CTX Is the Form Used for Integration into the Genome of Vibrio cholerae

1 reference

12 December 2020

Antibiotic stress induces genetic transformability in the human pathogen Streptococcus pneumoniae

1 reference

12 December 2020

The physical chemistry of cruciform structures in supercoiled DNA molecules.

1 reference

12 December 2020

Extrusion of an imperfect palindrome to a cruciform in superhelical DNA: complete determination of energetics using a statistical mechanical model

1 reference

12 December 2020

Identifiers

DOI

10.1038/EMBOJ.2010.151

1 reference

30 July 2017

1 reference

30 July 2017

1 reference