(Q34133291)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

title

Protein folding by distributed computing and the denatured state ensemble (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

main subject

protein folding

0 references

distributed computing

0 references

author

Nicolas L Fawzi

series ordinal

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

author name string

Neelan J Marianayagam

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

Teresa Head-Gordon

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

language of work or name

English

0 references

publication date

2 November 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

8 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

volume

102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

issue

46

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

page(s)

16684-16689

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

Influence of denatured and intermediate states of folding on protein aggregation

8 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Kinetics are probe-dependent during downhill folding of an engineered lambda6-85 protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Exploring the helix-coil transition via all-atom equilibrium ensemble simulations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Hidden complexity of free energy surfaces for peptide (protein) folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Using path sampling to build better Markovian state models: predicting the folding rate and mechanism of a tryptophan zipper beta hairpin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Intermediates and the folding of proteins L and G.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Trp zipper folding kinetics by molecular dynamics and temperature-jump spectroscopy.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Coarse-grained sequences for protein folding and design

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Analysis of the distributed computing approach applied to the folding of a small beta peptide

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Experimental tests of villin subdomain folding simulations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Atomistic protein folding simulations on the submillisecond time scale using worldwide distributed computing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

The Trp cage: folding kinetics and unfolded state topology via molecular dynamics simulations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Absolute comparison of simulated and experimental protein-folding dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Simulation of folding of a small alpha-helical protein in atomistic detail using worldwide-distributed computing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

On the simulation of protein folding by short time scale molecular dynamics and distributed computing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Simulations of beta-hairpin folding confined to spherical pores using distributed computing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Temperature-dependent helix-coil transition of an alanine based peptide

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1283817

Rattle: A “velocity” version of the shake algorithm for molecular dynamics calculations

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0506388102

On the transition coordinate for protein folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0506388102

Kinetics of Folding of the IgG Binding Domain of Peptostreptoccocal Protein L

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0506388102

Conformational Diffusion and Helix Formation Kinetics

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0506388102

Folding at the speed limit

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0506388102

An independent method for the analysis of protein folding kinetics from all-atom molecular dynamics simulations

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16267133

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0506388102

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16267133%20AND%20SRC:MED&resulttype=core&format=json

8 January 2020

PubMed publication ID

16267133

1 reference