(Q34148263)

English

Gene alterations at Drosophila inversion breakpoints provide prima facie evidence for natural selection as an explanation for rapid chromosomal evolution

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scholarly article

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Europe PubMed Central

31 July 2017

Gene alterations at Drosophila inversion breakpoints provide prima facie evidence for natural selection as an explanation for rapid chromosomal evolution (English)

1 reference

Europe PubMed Central

31 July 2017

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author name string

Yolanda Guillén

1

1 reference

Europe PubMed Central

31 July 2017

Alfredo Ruiz

2

1 reference

Europe PubMed Central

31 July 2017

language of work or name

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publication date

1 February 2012

1 reference

Europe PubMed Central

31 July 2017

1 reference

Europe PubMed Central

31 July 2017

13

1 reference

Europe PubMed Central

31 July 2017

53

1 reference

Europe PubMed Central

31 July 2017

Determinants and dynamics of genome accessibility

1 reference

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5 July 2018

Genomic organization of H2Av containing nucleosomes in Drosophila heterochromatin

1 reference

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5 July 2018

Chromatin higher-order structures and gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Birth and death of genes linked to chromosomal inversion.

1 reference

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5 July 2018

Identification of functional elements and regulatory circuits by Drosophila modENCODE

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5 July 2018

CDD: a Conserved Domain Database for the functional annotation of proteins

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5 July 2018

1 reference

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5 July 2018

How and why chromosome inversions evolve

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Origins, evolution, and phenotypic impact of new genes.

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5 July 2018

Fragile regions and not functional constraints predominate in shaping gene organization in the genus Drosophila

1 reference

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5 July 2018

Phylogeny disambiguates the evolution of heat-shock cis-regulatory elements in Drosophila

1 reference

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5 July 2018

Revisiting the Impact of Inversions in Evolution: From Population Genetic Markers to Drivers of Adaptive Shifts and Speciation?

1 reference

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5 July 2018

The transposon Galileo generates natural chromosomal inversions in Drosophila by ectopic recombination.

1 reference

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5 July 2018

Evolutionary breakpoints in the gibbon suggest association between cytosine methylation and karyotype evolution

1 reference

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5 July 2018

Transcriptional regulation of metabolism associated with the increased desiccation resistance of the cactophilic Drosophila mojavensis

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5 July 2018

General gene movement off the X chromosome in the Drosophila genus

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5 July 2018

Fundamental concepts in genetics: Effective population size and patterns of molecular evolution and variation

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5 July 2018

Sequence signatures of a recent chromosomal rearrangement in Drosophila mojavensis.

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5 July 2018

FlyBase : a database for the Drosophila research community

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5 July 2018

Replication stalling at unstable inverted repeats: interplay between DNA hairpins and fork stabilizing proteins

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5 July 2018

Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps.

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5 July 2018

Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes

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5 July 2018

The Foldback-like element Galileo belongs to the P superfamily of DNA transposons and is widespread within the Drosophila genus

1 reference

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5 July 2018

The molecular basis of host adaptation in cactophilic Drosophila: molecular evolution of a glutathione S-transferase gene (GstD1) in Drosophila mojavensis.

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5 July 2018

Molecular evolution of glutathione S-transferases in the genus Drosophila.

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5 July 2018

Drosophila biology in the genomic age.

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5 July 2018

A recurrent inversion on the eutherian X chromosome

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5 July 2018

Evolution of genes and genomes on the Drosophila phylogeny

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5 July 2018

Genome-scale analysis of positionally relocated genes

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5 July 2018

Segmental duplication implicated in the genesis of inversion 2Rj of Anopheles gambiae

1 reference

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5 July 2018

Positive selection near an inversion breakpoint on the neo-X chromosome of Drosophila americana

1 reference

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5 July 2018

Principles of genome evolution in the Drosophila melanogaster species group

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5 July 2018

MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0

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5 July 2018

Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila

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5 July 2018

Functional genomics of cactus host shifts in Drosophila mojavensis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Identification of core promoter modules in Drosophila and their application in accurate transcription start site prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Testing chromosomal phylogenies and inversion breakpoint reuse in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Differential usage of non-homologous end-joining and homologous recombination in double strand break repair

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Thermoprotection of synaptic transmission in a Drosophila heat shock factor mutant is accompanied by increased expression of Hsp83 and DnaJ-1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Rates and patterns of chromosomal evolution in Drosophila pseudoobscura and D. miranda

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Are molecular cytogenetics and bioinformatics suggesting diverging models of ancestral mammalian genomes?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Chromosome evolution in eukaryotes: a multi-kingdom perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Chromosome inversions, local adaptation and speciation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

ReAS: Recovery of ancestral sequences for transposable elements from the unassembled reads of a whole genome shotgun

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Repbase Update, a database of eukaryotic repetitive elements

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Evidence for rolling circle replication of tandem genes in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

A BAC-based physical map of the Drosophila buzzatii genome.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Molecular characterization and chromosomal distribution of Galileo, Kepler and Newton, three foldback transposable elements of the Drosophila buzzatii species complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Naturally occurring transposable elements disrupt hsp70 promoter function in Drosophila melanogaster

1 reference

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5 July 2018

Silencing of a gene adjacent to the breakpoint of a widespread Drosophila inversion by a transposon-induced antisense RNA.

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5 July 2018

The Drosophila melanogaster genome

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5 July 2018

Temporal patterns of fruit fly (Drosophila) evolution revealed by mutation clocks

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5 July 2018

The foldback-like transposon Galileo is involved in the generation of two different natural chromosomal inversions of Drosophila buzzatii

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Evolution of water conservation mechanisms in Drosophila

1 reference

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5 July 2018

Sequence variation of alcohol dehydrogenase (Adh) paralogs in cactophilic Drosophila.

1 reference

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5 July 2018

Assessing the impact of comparative genomic sequence data on the functional annotation of the Drosophila genome

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5 July 2018

Genome rearrangements in mammalian evolution: lessons from human and mouse genomes

1 reference

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5 July 2018

InterProScan--an integration platform for the signature-recognition methods in InterPro

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5 July 2018

Molecular characterization of two natural hotspots in the Drosophila buzzatii genome induced by transposon insertions

1 reference

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5 July 2018

Human chromosome 19 and related regions in mouse: conservative and lineage-specific evolution

1 reference

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5 July 2018

How malleable is the eukaryotic genome? Extreme rate of chromosomal rearrangement in the genus Drosophila

1 reference

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5 July 2018

A comparison of Hsp70 expression and thermotolerance in adults and larvae of three Drosophila species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Glutathione S-transferases--a review.

1 reference

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5 July 2018

High rate of DNA loss in the Drosophila melanogaster and Drosophila virilis species groups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Drosophila P-element transposase is a novel site-specific endonuclease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Recombination and gene flux caused by gene conversion and crossing over in inversion heterokaryotypes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Mobilization of a Minos transposon in Drosophila melanogaster chromosomes and chromatid repair by heteroduplex formation

1 reference

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5 July 2018

High intrinsic rate of DNA loss in Drosophila.

1 reference

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5 July 2018

Response of two heat shock genes to selection for knockdown heat resistance in Drosophila melanogaster

1 reference

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5 July 2018

A major superfamily of transmembrane facilitators that catalyse uniport, symport and antiport

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5 July 2018

Gross chromosome rearrangements mediated by transposable elements in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3355041

5 July 2018

Allelic and ectopic recombination between Ty elements in yeast.

1 reference

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5 July 2018

Evolution of the mojavensis cluster of cactophilic Drosophila with descriptions of two new species

1 reference

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5 July 2018

Isolation and characterization of a Drosophila hydei histone DNA repeat unit

1 reference

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5 July 2018

The Organization of the Histone Genes in Drosophila melanogaster: Functional and Evolutionary Implications

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5 July 2018

Generation of a widespread Drosophila inversion by a transposable element.

1 reference

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21 January 2018

Cloning and sequencing of the breakpoint regions of inversion 5g fixed in Drosophila buzzatii.

1 reference

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21 January 2018

The convergence of cytogenetics and rearrangement-based models for ancestral genome reconstruction

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21 January 2018

Testing chromosomal phylogenies and inversion breakpoint reuse in Drosophila. The martensis cluster revisited.

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21 January 2018

Rapid concerted evolution via gene conversion at the Drosophila hsp70 genes

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21 January 2018

A Drosophila RNA polymerase II transcription factor binds to the regulatory site of an hsp 70 gene.

1 reference

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21 January 2018

Hsp70 and larval thermotolerance in Drosophila melanogaster: how much is enough and when is more too much?

1 reference

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21 January 2018

Choosing BLAST options for better detection of orthologs as reciprocal best hits.

1 reference

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21 January 2018

Differential expression of small heat shock protein genes Hsp23 and Hsp40, and heat shock gene Hsr-omega in fruit flies (Drosophila melanogaster) along a microclimatic gradient.

1 reference

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28 October 2018

Drosophila polymorphism database (DPDB): a portal for nucleotide polymorphism in Drosophila

1 reference

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28 October 2018

Chromosomal evolution of elements B and C in the Sophophora subgenus of Drosophila: evolutionary rate and polymorphism.

1 reference

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28 October 2018

Population genetics and geographic variation of alcohol dehydrogenase (Adh) paralogs and glucose-6-phosphate dehydrogenase (G6pd) in Drosophila mojavensis

1 reference

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28 October 2018

GRIMM: genome rearrangements web server

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28 October 2018

Low occurrence of gene transposition events during the evolution of the genus Drosophila

1 reference

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28 October 2018

Using RepeatMasker to identify repetitive elements in genomic sequences

1 reference

https://pubmed.ncbi.nlm.nih.gov/22296923

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

THE EXPECTED FIXATION RATE OF CHROMOSOMAL INVERSIONS

1 reference

https://pubmed.ncbi.nlm.nih.gov/22296923

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-13-53

1 reference

Europe PubMed Central

31 July 2017

1 reference

Europe PubMed Central

31 July 2017

1 reference

Europe PubMed Central

31 July 2017

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