(Q34161886)

31 July 2017

Homology-independent discovery of replicating pathogenic circular RNAs by deep sequencing and a new computational algorithm (English)

1 reference

31 July 2017

Qingfa Wu

1

1 reference

31 July 2017

Ying Wang

2

1 reference

31 July 2017

Mengji Cao

3

1 reference

31 July 2017

Vitantonio Pantaleo

4

1 reference

31 July 2017

Joszef Burgyan

5

1 reference

31 July 2017

Wan-Xiang Li

6

1 reference

31 July 2017

Shou-Wei Ding

7

1 reference

31 July 2017

language of work or name

English

0 references

publication date

15 February 2012

1 reference

31 July 2017

6

1 reference

Proceedings of the National Academy of Sciences of the United States of America

inferred from page(s)

published in

1 reference

31 July 2017

109

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31 July 2017

10

1 reference

31 July 2017

3938-3943

1 reference

Comparison of dengue virus type 2-specific small RNAs from RNA interference-competent and -incompetent mosquito cells

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Virus-derived small interfering RNAs at the core of plant-virus interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

RNA-based antiviral immunity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Identification of grapevine microRNAs and their targets using high-throughput sequencing and degradome analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Assembly algorithms for next-generation sequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

In-depth sequencing of the siRNAs associated with peach latent mosaic viroid infection

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Deep sequencing of the small RNAs derived from two symptomatic variants of a chloroplastic viroid: implications for their genesis and for pathogenesis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

RNAi Targeting of West Nile Virus in Mosquito Midguts Promotes Virus Diversification

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Small RNAs and their roles in plant development.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Roles of plant small RNAs in biotic stress responses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

The biology of viroid-host interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Dicing of viral replication intermediates during silencing of latent Drosophila viruses

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Alphavirus-derived small RNAs modulate pathogenesis in disease vector mosquitoes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Mechanism of induction and suppression of antiviral immunity directed by virus-derived small RNAs in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Rapid Identification of Known and New RNA Viruses from Animal Tissues

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Viroids and viroid-host interactions.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Eggplant latent viroid, the candidate type species for a new genus within the family Avsunviroidae (hammerhead viroids)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Two chloroplastic viroids induce the accumulation of small RNAs associated with posttranscriptional gene silencing.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Replicating potato spindle tuber viroid RNA is accompanied by short RNA fragments that are characteristic of post-transcriptional gene silencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Genomic structure of three phenotypically different isolates of peach latent mosaic viroid: implications of the existence of constraints limiting the heterogeneity of viroid quasispecies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Replication of avocado sunblotch viroid: evidence for a symmetric pathway with two rolling circles and hammerhead ribozyme processing.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

A Replication Cycle for Viroids and Other Small Infectious RNA's

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Plus and minus RNAs of peach latent mosaic viroid self-cleave in vitro via hammerhead structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Potato spindle tuber viroid as inducer of RNA silencing in infected tomato

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1117815109

RNA silencing as related to viroid induced symptom expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1117815109

Accumulation of Potato spindle tuber viroid-specific small RNAs is accompanied by specific changes in gene expression in two tomato cultivars.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1117815109

A kissing-loop interaction in a hammerhead viroid RNA critical for its in vitro folding and in vivo viability.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1117815109

Extremely high mutation rate of a hammerhead viroid

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1117815109

Epigenetic modification of centromeric chromatin: hypomethylation of DNA sequences in the CENH3-associated chromatin in Arabidopsis thaliana and maize.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1117815109

The 21-nucleotide, but not 22-nucleotide, viral secondary small interfering RNAs direct potent antiviral defense by two cooperative argonautes in Arabidopsis thaliana

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Identification of viroids by gel electrophoresis

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3309787

Complete viral genome sequence and discovery of novel viruses by deep sequencing of small RNAs: A generic method for diagnosis, discovery and sequencing of viruses

28 October 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.1117815109

Small Silencing RNAs: Piecing Together a Viral Genome

21 January 2018

1 reference

12 December 2020

A two-dimensional electrophoretic technique for the detection of circular viroids and virusoids

1 reference

12 December 2020

Encapsidated circular viroid-like satellite RNAs (virusoids) of plants

1 reference

12 December 2020

Discovering viroids — a personal perspective

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.1117815109

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference