(Q34162323)

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Contrasting properties of gene-specific regulatory, coding, and copy number mutations in Saccharomyces cerevisiae: frequency, effects, and dominance

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scholarly article

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Europe PubMed Central

PubMed publication ID

31 July 2017

Contrasting properties of gene-specific regulatory, coding, and copy number mutations in Saccharomyces cerevisiae: frequency, effects, and dominance (English)

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Saccharomyces cerevisiae

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based on heuristic

inferred from title

author name string

Jonathan D Gruber

1

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Kara Vogel

2

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Gizem Kalay

3

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Patricia J Wittkopp

4

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

publication date

9 February 2012

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Europe PubMed Central

PubMed publication ID

31 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

2

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

e1002497

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

copyright license

Creative Commons Attribution 4.0 International

9 February 2012

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Variation in genome-wide mutation rates within and between human families

1 reference

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Natural selection on cis and trans regulation in yeasts

1 reference

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Quantification of variation in expression networks.

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1 reference

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1 reference

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Mutational and selective effects on copy-number variants in the human genome

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The evolutionary significance of cis-regulatory mutations

1 reference

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Genetics of global gene expression

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Evolutionary constraints on yeast protein size

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Genomic sources of regulatory variation in cis and in trans

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Transcriptional regulatory networks in Saccharomyces cerevisiae

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inferred from PubMed ID database lookup

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1 reference

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inferred from PubMed ID database lookup

Fermentable and nonfermentable carbon sources sustain constitutive levels of expression of yeast triosephosphate dehydrogenase 3 gene from distinct promoter elements

1 reference

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MUTAGENIC ACTION DURING MEIOSIS AND ANTIMUTAGENIC ACTION DURING MITOSIS BY 5-AMINOACRIDINE IN YEAST

1 reference

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The transcriptional consequences of mutation and natural selection in Caenorhabditis elegans

1 reference

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inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PGEN.1002497

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

ResearchGate publication ID

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