(Q34172536)

31 July 2017

title

Backbone dipoles generate positive potentials in all proteins: origins and implications of the effect (English)

1 reference

31 July 2017

M R Gunner

1

1 reference

31 July 2017

M A Saleh

2

1 reference

31 July 2017

E Cross

3

1 reference

31 July 2017

A ud-Doula

4

1 reference

31 July 2017

M Wise

5

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31 July 2017

language of work or name

English

0 references

publication date

1 March 2000

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31 July 2017

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31 July 2017

volume

78

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31 July 2017

issue

3

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31 July 2017

page(s)

1126-1144

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A helix propensity scale based on experimental studies of peptides and proteins

31 July 2017

cites work

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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5 July 2018

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Comparison of the structures and the crystal contacts of trypanosomal triosephosphate isomerase in four different crystal forms

5 July 2018

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5 July 2018

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Calculation of electrostatic effects at the amino terminus of an alpha helix

5 July 2018

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Compact intermediate states in protein folding.

5 July 2018

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Electrostatic calculations of amino acid titration and electron transfer, Q-AQB-->QAQ-B, in the reaction center

5 July 2018

1 reference

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5 July 2018

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Free energy determinants of secondary structure formation: I. alpha-Helices

5 July 2018

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Perturbed pKA-values in the denatured states of proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Structures of product and inhibitor complexes of Streptomyces griseus protease A at 1.8 A resolution. A model for serine protease catalysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

An analysis of incorrectly folded protein models. Implications for structure predictions.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Hydrogen bonding in globular proteins

5 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Conformation of Polypeptides and Proteins

5 July 2018

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The mean geometry of the peptide unit from crystal structure data.

5 July 2018

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The role of the alpha-helix dipole in protein function and structure

5 July 2018

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Stabilization of charges on isolated ionic groups sequestered in proteins by polarized peptide units

5 July 2018

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Structure of phosphate-free ribonuclease A refined at 1.26 .ANG

5 July 2018

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Amino acid preferences for specific locations at the ends of alpha helices

5 July 2018

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5 July 2018

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Stabilization of protein structure by interaction of alpha-helix dipole with a charged side chain

5 July 2018

1 reference

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Control of the redox potential of cytochrome c and microscopic dielectric effects in proteins.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Sulfate-binding protein dislikes protonated oxyacids. A molecular explanation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Electrostatic interactions in wild-type and mutant recombinant human myoglobins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Crystal structures of the helix-loop-helix calcium-binding proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

pKa's of ionizable groups in proteins: atomic detail from a continuum electrostatic model

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

High specificity of a phosphate transport protein determined by hydrogen bonds

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Mechanism of acid-induced folding of proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Protein stability: electrostatics and compact denatured states

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Dipoles localized at helix termini of proteins stabilize charges

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Electrostatic control of midpoint potentials in the cytochrome subunit of the Rhodopseudomonas viridis reaction center

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

In a staphylococcal nuclease mutant the side-chain of a lysine replacing valine 66 is fully buried in the hydrophobic core

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Structures of met and azidomet hemerythrin at 1.66 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Calcium-binding sites in proteins: a structural perspective

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Structural and thermodynamic consequences of burying a charged residue within the hydrophobic core of T4 lysozyme

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

An unlikely sugar substrate site in the 1.65 A structure of the human aldose reductase holoenzyme implicated in diabetic complications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Three-dimensional structure of recombinant human muscle fatty acid-binding protein

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Hydrogen bonding in globular proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Protein control of iron-sulfur cluster redox potentials

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

The Protein Data Bank: a computer-based archival file for macromolecular structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

The alpha-helix as an electric macro-dipole

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

The alpha-helix dipole and the properties of proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Evolutionary processes possibly limiting the kinds of amino acids in protein to twenty: A review

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Anion-induced folding of Staphylococcal nuclease: characterization of multiple equilibrium partially folded intermediates.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

The determinants of pKas in proteins

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

The energetics of ion-pair and hydrogen-bonding interactions in a helical peptide

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300716

Multiple-site titration curves of proteins: an analysis of exact and approximate methods for their calculation

28 October 2018

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CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

7 January 2021

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Alpha-helix-forming propensities in peptides and proteins

7 January 2021

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Patterns in ionizable side chain interactions in protein structures

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

Dipoles of the α-helix and β-sheet: their role in protein folding

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

pKA values of carboxyl groups in the native and denatured states of barnase: the pKA values of the denatured state are on average 0.4 units lower than those of model compounds

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

Ribonuclease T1 is stabilized by cation and anion binding

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

Helix Propensities of Basic Amino Acids Increase with the Length of the Side-chain

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

On the environment of ionizable groups in globular proteins

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

Histidine residues at the N- and C-termini of alpha-helices: perturbed pKas and protein stability

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

Tests of the helix dipole model for stabilization of α-helices

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

In a staphylococcal nuclease mutant the side-chain of a lysine replacing valine 66 is fully buried in the hydrophobic core

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

On the calculation of pKas in proteins

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

Structural origins of pH and ionic strength effects on protein stability. Acid denaturation of sperm whale apomyoglobin

7 January 2021

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https://api.crossref.org/works/10.1016%2FS0006-3495%2800%2976671-9

10.1016/S0006-3495(00)76671-9

7 January 2021

Identifiers

DOI

1 reference

31 July 2017

1 reference

31 July 2017

1 reference