(Q34176931)

31 July 2017

Model channel ion currents in NaCl-extended simple point charge water solution with applied-field molecular dynamics (English)

1 reference

31 July 2017

P S Crozier

1

1 reference

31 July 2017

D Henderson

series ordinal

2

1 reference

31 July 2017

R L Rowley

series ordinal

3

1 reference

31 July 2017

D D Busath

series ordinal

4

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 December 2001

1 reference

31 July 2017

1 reference

31 July 2017

81

1 reference

31 July 2017

3077-3089

1 reference

31 July 2017

6

1 reference

Electrostatic modeling of dipole-ion interactions in gramicidinlike channels

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Noncontact dipole effects on channel permeation. V. Computed potentials for fluorinated gramicidin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Noncontact dipole effects on channel permeation. IV. Kinetic model of 5F-Trp(13) gramicidin A currents

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Mechanisms of permeation and selectivity in calcium channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Ion channels, permeation, and electrostatics: insight into the function of KcsA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Binding and selectivity in L-type calcium channels: a mean spherical approximation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Molecular dynamics estimates of ion diffusion in model hydrophobic and KcsA potassium channels.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Structure and function of bacterial outer membrane proteins: barrels in a nutshell

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

A Grand Canonical Monte Carlo-Brownian dynamics algorithm for simulating ion channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Three-dimensional Poisson-Nernst-Planck theory studies: influence of membrane electrostatics on gramicidin A channel conductance

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Homology modeling and molecular dynamics simulation studies of an inward rectifier potassium channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Molecular dynamics of the KcsA K(+) channel in a bilayer membrane

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Ion permeation mechanism of the potassium channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Tests of continuum theories as models of ion channels. II. Poisson-Nernst-Planck theory versus brownian dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Tests of continuum theories as models of ion channels. I. Poisson-Boltzmann theory versus Brownian dynamics.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Membrane simulations: bigger and better?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Simulations of ion permeation through a potassium channel: molecular dynamics of KcsA in a phospholipid bilayer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Permeation of ions across the potassium channel: Brownian dynamics studies

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Molecular dynamics study of the KcsA potassium channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

The cavity and pore helices in the KcsA K+ channel: electrostatic stabilization of monovalent cations.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Statistical mechanical equilibrium theory of selective ion channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Selectivity and permeation in calcium release channel of cardiac muscle: alkali metal ions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

A lattice relaxation algorithm for three-dimensional Poisson-Nernst-Planck theory with application to ion transport through the gramicidin A channel.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Noncontact dipole effects on channel permeation. I. Experiments with (5F-indole)Trp13 gramicidin A channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Study of ionic currents across a model membrane channel using Brownian dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

The Structure of the Potassium Channel: Molecular Basis of K+ Conduction and Selectivity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Permeation through the calcium release channel of cardiac muscle

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Permeation through an open channel: Poisson-Nernst-Planck theory of a synthetic ionic channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

VMD: visual molecular dynamics

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Molecular dynamics simulations of the gramicidin channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Brownian dynamics study of a multiply-occupied cation channel: application to understanding permeation in potassium channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Comparison of Nernst-Planck and reaction rate models for multiply occupied channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Ion movement through gramicidin A channels. Studies on the diffusion-controlled association step

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Ion movement through gramicidin A channels. Interfacial polarization effects on single-channel current measurements

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Stochastic theory of singly occupied ion channels. II. Effects of access resistance and potential gradients extending into the bath

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Electrodiffusion of ions approaching the mouth of a conducting membrane channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Exact continuum solution for a channel that can be occupied by two ions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Stochastic theory of ion movement in channels with single-ion occupancy. Application to sodium permeation of gramicidin channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Amino acid substitutions and ion channel function. Model-dependent conclusions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Diffusion-limited ion flow through pores

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Electrostatic calculations for an ion channel. II. Kinetic behavior of the gramicidin A channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Comparison of gramicidin A and gramicidin M channel conductance dispersities

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Water and potassium dynamics inside the KcsA K(+) channel.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

Modulating dipoles for structure-function correlations in the gramicidin A channel.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1301770

The missing term in effective pair potentials

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Monte Carlo Simulations of the Mechanism for Channel Selectivity: The Competition between Volume Exclusion and Charge Neutrality

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Monte Carlo simulation of an ion-dipole mixture as a model of an electrical double layer

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Monte Carlo Study of the Effect of Ion and Channel Size on the Selectivity of a Model Calcium Channel†

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

A model of calcium channels

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Molecular dynamics simulation of continuous current flow through a model biological membrane channel

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Constrained molecular dynamics: Simulations of liquid alkanes with a new algorithm

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Size selectivity of narrow pores

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Potassium and sodium binding to the outer mouth of the K+ channel

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Violation of the electroneutrality condition in confined charged fluids

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

Transport of oppositely charged lipophilic probe ions in lipid bilayer membranes having various structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

A smooth particle mesh Ewald method

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2801%2975946-2

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(01)75946-2

1 reference

31 July 2017

1 reference

1 reference

31 July 2017

1 reference