(Q34178146)

31 July 2017

New insights into the allosteric mechanism of human hemoglobin from molecular dynamics simulations (English)

1 reference

31 July 2017

Liliane Mouawad

1

1 reference

31 July 2017

David Perahia

series ordinal

2

1 reference

31 July 2017

Charles H Robert

series ordinal

3

1 reference

31 July 2017

Christophe Guilbert

series ordinal

4

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 June 2002

1 reference

31 July 2017

1 reference

31 July 2017

82

1 reference

31 July 2017

3224-3245

1 reference

31 July 2017

6

1 reference

A signature of the T ---> R transition in human hemoglobin

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Interface sliding as illustrated by the multiple quaternary structures of liganded hemoglobin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Oxygen binding by α(Fe2+)2β(Ni2+)2 hemoglobin crystals

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Molecular dynamics of human methemoglobin: the transmission of conformational information between subunits in an alpha beta dimer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The early stage of folding of villin headpiece subdomain observed in a 200-nanosecond fully solvated molecular dynamics simulation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The stereochemical mechanism of the cooperative effects in hemoglobin revisited.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

High-resolution crystal structures of human hemoglobin with mutations at tryptophan 37beta: structural basis for a high-affinity T-state,

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

A possible allosteric communication pathway identified through a resonance Raman study of four beta37 mutants of human hemoglobin A.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Can a two-state MWC allosteric model explain hemoglobin kinetics?

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Crystal structure of T state haemoglobin with oxygen bound at all four haems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Oxygen and CO binding to triply NO and asymmetric NO/CO hemoglobin hybrids

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The 1.9 A structure of deoxy beta 4 hemoglobin. Analysis of the partitioning of quaternary-associated and ligand-induced changes in tertiary structure

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The T-to-R transformation in hemoglobin: a reevaluation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Allosteric transition intermediates modelled by crosslinked haemoglobins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The crystal structure of human deoxyhaemoglobin at 1.74 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Structure of human oxyhaemoglobin at 2.1 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Reaction pathway for the quaternary structure change in hemoglobin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The effect of quaternary structure on the kinetics of conformational changes and nanosecond geminate rebinding of carbon monoxide to hemoglobin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Structure of haemoglobin in the deoxy quaternary state with ligand bound at the alpha haems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Refinement of a partially oxygenated T state human haemoglobin at 1.5 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Structure of deoxy-quaternary haemoglobin with liganded beta subunits

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Dynamics of the quaternary conformational change in trout hemoglobin.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Application of linear free energy relations to protein conformational changes: the quaternary structural change of hemoglobin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The mutation beta 99 Asp-Tyr stabilizes Y--a new, composite quaternary state of human hemoglobin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Theoretical determination of conformational paths in citrate synthase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

A third quaternary structure of human hemoglobin A at 1.7-A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

High resolution crystal structures and comparisons of T-state deoxyhaemoglobin and two liganded T-state haemoglobins: T(alpha-oxy)haemoglobin and T(met)haemoglobin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

A new mode for heme-heme interactions in hemoglobin associated with distal perturbations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The Protein Data Bank: a computer-based archival file for macromolecular structures

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Haemoglobin: The structural changes related to ligand binding and its allosteric mechanism

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Allosteric free energy changes at the alpha 1 beta 2 interface of human hemoglobin probed by proton exchange of Trp beta 37.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Distal ligand reactivity and quaternary structure studies of proximally detached hemoglobins

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The maize regulatory gene B-Peru contains a DNA rearrangement that specifies tissue-specific expression through both positive and negative promoter elements.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

The quaternary structure of carbonmonoxy hemoglobin ypsilanti.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

Conformational transitions using molecular dynamics with minimum biasing.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1302112

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Allosteric interpretation of the oxygen-binding reaction of human hemoglobin tetramers

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Hidden thermodynamics of mutant proteins: a molecular dynamics analysis

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Hemoglobin tertiary structural change on ligand binding. Its role in the co-operative mechanism

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Motions in hemoglobin studied by normal mode analysis and energy minimization: evidence for the existence of tertiary T-like, quaternary R-like intermediate structures

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

High resolution nuclear magnetic resonance spectra of hemoglobin. 3. The half-ligated state and allosteric interactions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Stereochemistry of Cooperative Effects in Haemoglobin: Haem–Haem Interaction and the Problem of Allostery

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Targeted molecular dynamics: a new approach for searching pathways of conformational transitions

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Oxygen equilibrium properties of nickel(II)-iron(II) hybrid hemoglobins cross-linked between 82 beta 1 and 82 beta 2 lysyl residues by bis(3,5-dibromosalicyl)fumarate: determination of the first two-step microscopic Adair constants for human hemoglo

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Mechanism of ligand binding to Ni(II)-Fe(II) hybrid hemoglobins

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Novel Recombinant Hemoglobin, rHb (βN108Q), with Low Oxygen Affinity, High Cooperativity, and Stability against Autoxidation†

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Effects of Substitutions of Lysine and Aspartic Acid for Asparagine at β108 and of Tryptophan for Valine at α96 on the Structural and Functional Properties of Human Normal Adult Hemoglobin: Roles of α1β1and α1β2Subunit Interfaces in the Coopera

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Rate Constants for O2and CO Binding to the α and β Subunits within the R and T States of Human Hemoglobin

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

Computer "Experiments" on Classical Fluids. I. Thermodynamical Properties of Lennard-Jones Molecules

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2802%2975665-8

The porphyrin-iron hybrid hemoglobins. Absence of the Fe-His bonds in one type of subunits favors a deoxy-like structure with low oxygen affinity

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12023247

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Proton nuclear magnetic resonance and electron paramagnetic resonance investigation of alpha-alpha cross-linked Fe-Co hybrid hemoglobins

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12023247

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(02)75665-8

1 reference

release_qvqrnpke2fhz3ofhwngrtbcisy

31 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qvqrnpke2fhz3ofhwngrtbcisy

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

1302112

1 reference

31 July 2017

1 reference