(Q34183932)

31 July 2017

Residue ionization and ion transport through OmpF channels (English)

1 reference

31 July 2017

Ekaterina M Nestorovich

series ordinal

1

1 reference

31 July 2017

Tatiana K Rostovtseva

series ordinal

2

1 reference

31 July 2017

Sergey M Bezrukov

series ordinal

3

1 reference

31 July 2017

language of work or name

English

0 references

publication date

1 December 2003

1 reference

31 July 2017

1 reference

31 July 2017

85

1 reference

31 July 2017

3718-3729

1 reference

31 July 2017

6

1 reference

Solute uptake through general porins

31 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Direct detection of antibody-antigen binding using an on-chip artificial pore

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Molecular basis of voltage gating of OmpF porin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Designed to penetrate: time-resolved interaction of single antibiotic molecules with bacterial pores

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Alteration of pore properties of Escherichia coli OmpF induced by mutation of key residues in anti-loop 3 region

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Imaging the electrostatic potential of transmembrane channels: atomic probe microscopy of OmpF porin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Transport of maltodextrins through maltoporin: a single-channel study

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Structure and function of pore-forming beta-barrels from bacteria.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Partitioning of differently sized poly(ethylene glycol)s into OmpF porin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Stochastic sensors inspired by biology.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Ion-beam sculpting at nanometre length scales

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Role of charged residues at the OmpF porin channel constriction probed by mutagenesis and simulation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Structure and function of bacterial outer membrane proteins: barrels in a nutshell

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

A Grand Canonical Monte Carlo-Brownian dynamics algorithm for simulating ion channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Positive cooperativity without domains or subunits in a monomeric membrane channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Comparative aspects of the diffusion of norfloxacin, cefepime and spermine through the F porin channel of Enterobacter cloacae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Ion channels as molecular coulter counters to probe metabolite transport

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Substitutions in the eyelet region disrupt cefepime diffusion through the Escherichia coli OmpF channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Crystal structure and functional characterization of OmpK36, the osmoporin of Klebsiella pneumoniae

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Mechanisms of solute transport through outer membrane porins: burning down the house

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Stability of trimeric OmpF porin: the contributions of the latching loop L2

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Voltage gating is a fundamental feature of porin and toxin beta-barrel membrane channels

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Computational observation of an ion permeation through a channel protein.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

A molecular dynamics study of the pores formed by Escherichia coli OmpF porin in a fully hydrated palmitoyloleoylphosphatidylcholine bilayer

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

ATP transport through a single mitochondrial channel, VDAC, studied by current fluctuation analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Voltage-gating of Escherichia coli porin: a cystine-scanning mutagenesis study of loop 3.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Voltage sensing in the PhoE and OmpF outer membrane porins of Escherichia coli: role of charged residues

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Voltage gating of Escherichia coli porin channels: role of the constriction loop

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

A novel method for structure-based prediction of ion channel conductance properties.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Computer simulations of the OmpF porin from the outer membrane of Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Structure of staphylococcal alpha-hemolysin, a heptameric transmembrane pore

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Characterization of individual polynucleotide molecules using a membrane channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Structural and functional characterization of OmpF porin mutants selected for larger pore size. I. Crystallographic analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Probing alamethicin channels with water-soluble polymers. Effect on conductance of channel states

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Protonation dynamics of the alpha-toxin ion channel from spectral analysis of pH-dependent current fluctuations

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Refined structure of the porin from Rhodopseudomonas blastica. Comparison with the porin from Rhodobacter capsulatus

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Structural and functional alterations of a colicin-resistant mutant of OmpF porin from Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Matrix protein in planar membranes: clusters of channels in a native environment and their functional reassembly

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Ion movements in gramicidin pores. An example of single-file transport

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Formation of bimolecular membranes from lipid monolayers and a study of their electrical properties

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Permeation of hydrophilic molecules through the outer membrane of gram-negative bacteria. Review on bacterial porins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Diffusion of beta-lactam antibiotics through the porin channels of Escherichia coli K-12

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Molecular basis of bacterial outer membrane permeability

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Mutations that alter the pore function of the OmpF porin of Escherichia coli K12.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Direct measurement of proton transfer rates to a group controlling the dihydropyridine-sensitive Ca2+ channel

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Channel-closing activity of porins from Escherichia coli in bilayer lipid membranes.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

The ubiquitous presence of channels with wide lumens and their gating by voltage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

The three-dimensional structure of porin from Rhodobacter capsulatus at 3 A resolution

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Acid pH decreases OmpF and OmpC channel size in vivo

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Effects of pH on bacterial porin function

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

A simple method for the determination of the pore radius of ion channels in planar lipid bilayer membranes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Crystal structures explain functional properties of two E. coli porins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Porins and specific channels of bacterial outer membranes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Ionic selectivity of pores formed by the matrix protein (porin) of Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Matrix protein from Escherichia coli outer membranes forms voltage-controlled channels in lipid bilayers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Formation of large, ion-permeable membrane channels by the matrix protein (porin) of Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Orientation and interactions of dipolar molecules during transport through OmpF porin

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Ion permeation and selectivity of OmpF porin: a theoretical study based on molecular dynamics, Brownian dynamics, and continuum electrodiffusion theory.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Examining noise sources at the single-molecule level: 1/f noise of an open maltoporin channel.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Probing sugar translocation through maltoporin at the single channel level

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Brownian dynamics simulation of ion flow through porin channels.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Current noise reveals protonation kinetics and number of ionizable sites in an open protein ion channel.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

A novel approach to study the geometry of the water lumen of ion channels: colicin Ia channels in planar lipid bilayers.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Electrostatic properties of two porin channels from Escherichia coli

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Mechanisms of interaction of permeant ions and protons with dihydropyridine-sensitive calcium channels

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1303675

Ionic selectivity of pores formed by the matrix protein (porin) of Escherichia coli

28 October 2018

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Counting polymers moving through a single ion channel

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Molecular basis for the polyamine-ompF porin interactions: inhibitor and mutant studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

The mechanism of ion selectivity of OmpF-porin pores of Escherichia coli

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Inhibitory effect of acidic pH on OmpC porin: wild-type and mutant studies

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Structural and functional characterization of OmpF porin mutants selected for larger pore size. II. Functional characterization

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Dynamics of polynucleotide transport through nanometre-scale pores

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Single molecule measurements of DNA transport through a nanopore

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Voltage and pH-induced channel closure of porin OmpF visualized by atomic force microscopy

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

Understanding the function of bacterial outer membrane channels by reconstitution into black lipid membranes

7 January 2021

1 reference

https://api.crossref.org/works/10.1016%2FS0006-3495%2803%2974788-2

10.1016/S0006-3495(03)74788-2

7 January 2021

Identifiers

DOI

1 reference

31 July 2017

1 reference

31 July 2017

1 reference