(Q34185992)

31 July 2017

1 reference

title

Genomic strategies to identify mammalian regulatory sequences (English)

1 reference

ORCID Public Data File 2021

31 July 2017

1 reference

author name string

Pennacchio LA

series ordinal

1

1 reference

PubMed ID

11253049

31 July 2017

Rubin EM

series ordinal

2

1 reference

31 July 2017

1 February 2001

1 reference

31 July 2017

Nature Reviews Genetics

1 reference

31 July 2017

2

1 reference

31 July 2017

100-109

1 reference

31 July 2017

2

1 reference

https://scigraph.springernature.com/pub.10.1038/35052548

31 July 2017

0 references

cites work

Hunting with traps: genome-wide strategies for gene discovery and functional analysis

1 reference

7 January 2021

Trapping of mammalian promoters by Cre-lox site-specific recombination

1 reference

7 January 2021

Selection of DNA clones with enhancer sequences

1 reference

7 January 2021

Searching for regulatory elements in human noncoding sequences.

1 reference

7 January 2021

Long Human–Mouse Sequence Alignments Reveal Novel Regulatory Elements: A Reason to Sequence the Mouse Genome

1 reference

7 January 2021

Conserved noncoding sequences are reliable guides to regulatory elements.

1 reference

7 January 2021

Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons

1 reference

7 January 2021

Analysis of vertebrate SCL loci identifies conserved enhancers

1 reference

7 January 2021

The transcriptional program of sporulation in budding yeast

1 reference

7 January 2021

Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization

1 reference

7 January 2021

Systematic determination of genetic network architecture

1 reference

7 January 2021

Identification of regulatory regions which confer muscle-specific gene expression.

1 reference

7 January 2021

Synexpression groups in eukaryotes

1 reference

7 January 2021

Genomics, gene expression and DNA arrays

1 reference

7 January 2021

Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae

1 reference

7 January 2021

Promoter analysis of co-regulated genes in the yeast genome

1 reference

7 January 2021

Compilation of vertebrate-encoded transcription factors

1 reference

7 January 2021

Computer-assisted prediction, classification, and delimitation of protein binding sites in nucleic acids

1 reference

7 January 2021

Object-oriented transcription factors database (ooTFD)

1 reference

7 January 2021

Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL

1 reference

7 January 2021

COMPEL: a database on composite regulatory elements providing combinatorial transcriptional regulation

1 reference

7 January 2021

DIALIGN 2: improvement of the segment-to-segment approach to multiple sequence alignment

1 reference

7 January 2021

The eukaryotic promoter database (EPD).

1 reference

7 January 2021

MatInd and MatInspector: new fast and versatile tools for detection of consensus matches in nucleotide sequence data

1 reference

7 January 2021

TRANSFAC: an integrated system for gene expression regulation

1 reference

7 January 2021

Locus control regions: coming of age at a decade plus

1 reference

7 January 2021

Faithful expression of the human 5q31 cytokine cluster in transgenic mice.

1 reference

7 January 2021

The apolipoprotein(a) gene is regulated by sex hormones and acute-phase inducers in YAC transgenic mice.

1 reference

7 January 2021

The mouse beta-globin locus control region: hypersensitive sites 3 and 4

1 reference

7 January 2021

Human and mouse T-cell receptor loci: genomics, evolution, diversity, and serendipity.

1 reference

7 January 2021

Striking sequence similarity over almost 100 kilobases of human and mouse T–cell receptor DNA

1 reference

7 January 2021

Gene regulation and deregulation: a beta globin perspective

1 reference

7 January 2021

A dominant control region from the human beta-globin locus conferring integration site-independent gene expression

1 reference

7 January 2021

Active conservation of noncoding sequences revealed by three-way species comparisons

1 reference

7 January 2021

Sequence and comparative analysis of the rabbit alpha-like globin gene cluster reveals a rapid mode of evolution in a G + C-rich region of mammalian genomes

1 reference

7 January 2021

Quantifying DNA-protein interactions by double-stranded DNA arrays.

1 reference

7 January 2021

Comparison of the consensus sequence flanking translational start sites in Drosophila and vertebrates

1 reference

7 January 2021

Models for prediction and recognition of eukaryotic promoters

1 reference

7 January 2021

A computational genomics approach to the identification of gene networks

1 reference

7 January 2021

Extracting regulatory sites from the upstream region of yeast genes by computational analysis of oligonucleotide frequencies.

1 reference

7 January 2021

Genes regulated cooperatively by one or more transcription factors and their identification in whole eukaryotic genomes

1 reference

7 January 2021

Embryonic epsilon and gamma globin genes of a prosimian primate (Galago crassicaudatus). Nucleotide and amino acid sequences, developmental regulation and phylogenetic footprints.

1 reference

7 January 2021

Cross-species characterization of the promoter region of the cystic fibrosis transmembrane conductance regulator gene reveals multiple levels of regulation.

1 reference

7 January 2021

Evolutionary strategies for the elucidation of cis and trans factors that regulate the developmental switching programs of the beta-like globin genes

1 reference

7 January 2021

Number of CpG islands and genes in human and mouse

1 reference

7 January 2021

Isolation of CpG islands from large genomic clones

1 reference

7 January 2021

Identification of genes within CpG-enriched DNA from human chromosome 4p16.3.

1 reference

7 January 2021

Isolation of estrogen-responsive genes with a CpG island library

1 reference

7 January 2021

Choice of enzymes for mapping based on CpG islands in the human genome

1 reference

7 January 2021

Quick identification and localization of CpG islands in large genomic fragments by partial digestion with Hpa II and Hha I

1 reference

7 January 2021

The DNA sequence of human chromosome 22

1 reference

7 January 2021

Large-scale human promoter mapping using CpG islands.

1 reference

7 January 2021

Regulatory elements and expression profiles

1 reference

7 January 2021

Applications of DNA microarrays to the transcriptional analysis of mammalian genomes

1 reference

7 January 2021

Genomic analysis of gene expression in C. elegans.

1 reference

7 January 2021

Human-mouse genome comparisons to locate regulatory sites

1 reference

7 January 2021

Evolution at two levels in humans and chimpanzees

1 reference

7 January 2021

In search of the whales' sisters.

1 reference

7 January 2021

The mitochondrial genome of the sperm whale and a new molecular reference for estimating eutherian divergence dates.

1 reference

7 January 2021

Analyses of mitochondrial genomes strongly support a hippopotamus-whale clade

1 reference

7 January 2021

Molecular evidence from retroposons that whales form a clade within even-toed ungulates.

1 reference

7 January 2021

Phylogenetic relationships among cetartiodactyls based on insertions of short and long interpersed elements: hippopotamuses are the closest extant relatives of whales

1 reference

7 January 2021

Going the distance: a current view of enhancer action

1 reference

7 January 2021

Locus control regions, chromatin activation and transcription.

1 reference

7 January 2021

Activation by locus control regions?

1 reference

7 January 2021

Stopped at the border: boundaries and insulators

1 reference

7 January 2021

The role of insulator elements in defining domains of gene expression.

1 reference

7 January 2021

Transcriptional control and the role of silencers in transcriptional regulation in eukaryotes

1 reference

7 January 2021

Facilitation of chromatin dynamics by SARs

1 reference

7 January 2021

Basic local alignment search tool

1 reference

7 January 2021

Human and mouse gene structure: comparative analysis and application to exon prediction

1 reference

7 January 2021

Alignment of whole genomes

1 reference

7 January 2021

VISTA : visualizing global DNA sequence alignments of arbitrary length

1 reference

7 January 2021

PipMaker--a web server for aligning two genomic DNA sequences

1 reference

7 January 2021

Identifiers

DOI

10.1038/35052548

1 reference

PubMed ID

11253049

Dimensions Publication ID

31 July 2017

0 references

1 reference

PubMed ID

11253049