(Q34187086)

31 July 2017

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title

Restriction endonucleases: classification, properties, and applications (English)

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31 July 2017

Raymond J Williams

1

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31 July 2017

1 March 2003

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31 July 2017

Molecular Biotechnology

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31 July 2017

23

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31 July 2017

3

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31 July 2017

225-243

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https://scigraph.springernature.com/pub.10.1385/mb:23:3:225

31 July 2017

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cites work

BaeI, another unusual BcgI-like restriction endonuclease

1 reference

12 December 2020

Phosphorothioate substrates for the SfiI restriction endonuclease

1 reference

12 December 2020

SfiI endonuclease activity is strongly influenced by the non-specific sequence in the middle of its recognition site

1 reference

12 December 2020

Comparative genomics of the restriction-modification systems in Helicobacter pylori

1 reference

12 December 2020

Single-site enzymatic cleavage of yeast genomic DNA mediated by triple helix formation

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12 December 2020

Kinetic characterization of linear diffusion of the restriction endonuclease EcoRV on DNA.

1 reference

12 December 2020

DNA affinity cleaving analysis of homeodomain-DNA interaction: identification of homeodomain consensus sites in genomic DNA

1 reference

12 December 2020

Structure of the tetrameric restriction endonuclease NgoMIV in complex with cleaved DNA

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12 December 2020

Introduction of asymmetry in the naturally symmetric restriction endonuclease EcoRV to investigate intersubunit communication in the homodimeric protein

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12 December 2020

Reagents for the site-specific cleavage of megabase DNA.

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12 December 2020

Chimeric restriction endonuclease

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12 December 2020

DNA cleavage at two recognition sites by the SfiI restriction endonuclease: salt dependence of cis and trans interactions between distant DNA sites

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12 December 2020

A novel endonuclease mechanism directly visualized for I-PpoI

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12 December 2020

The Cfr10I restriction enzyme is functional as a tetramer

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12 December 2020

Incorporation of an EDTA-metal complex at a rationally selected site within a protein: application to EDTA-iron DNA affinity cleaving with catabolite gene activator protein (CAP) and Cro

1 reference

12 December 2020

Cleavage of single strand oligonucleotides and bacteriophage phi X174 DNA by Msp I endonuclease

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12 December 2020

FokI dimerization is required for DNA cleavage

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12 December 2020

Purification of a new restriction endonuclease, StyI, from Escherichia coli carrying the hsd+ miniplasmid.

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12 December 2020

DNA topoisomerase and recombinase activities in Nae I restriction endonuclease

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12 December 2020

Chimeric restriction enzyme: Gal4 fusion to FokI cleavage domain

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12 December 2020

FokI requires two specific DNA sites for cleavage

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12 December 2020

EcoRV-T94V: a mutant restriction endonuclease with an altered substrate specificity towards modified oligodeoxynucleotides.

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12 December 2020

Structural, functional, and evolutionary relationships between lambda-exonuclease and the type II restriction endonucleases

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12 December 2020

Oligonucleotide activation of the type IIe restriction enzyme NaeI for digestion of refractory sites.

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12 December 2020

Structure of the multimodular endonuclease FokI bound to DNA

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12 December 2020

Duplex regions in "single-stranded" phiX174 DNA are cleaved by a restriction endonuclease from Haemophilus aegyptius

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12 December 2020

Purification and properties of the Eco57I restriction endonuclease and methylase--prototypes of a new class (type IV)

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12 December 2020

Engineering a nicking endonuclease N.AlwI by domain swapping

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12 December 2020

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12 December 2020

Cloning the modification methylase gene of Bacillus sphaericus R in Escherichia coli

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12 December 2020

Type II restriction endonucleases: structural, functional and evolutionary relationships

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12 December 2020

Site-specific cleavage of DNA–RNA hybrids by zinc finger/FokI cleavage domain fusions

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12 December 2020

A family of regulatory genes associated with type II restriction-modification systems

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12 December 2020

Class-IIS restriction enzymes--a review

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12 December 2020

Finding sequence motifs in groups of functionally related proteins

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12 December 2020

The regulatory C proteins from different restriction-modification systems can cross-complement

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12 December 2020

Analyzing the functional organization of a novel restriction modification system, the BcgI system

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12 December 2020

Restriction and modification systems

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12 December 2020

Digestion of terminal restriction endonuclease recognition sites on PCR products

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12 December 2020

The Mechanism of DNA Cleavage by the Type II. Restriction Enzyme EcoRV: Asp36 Is Not Directly Involved in DNA Cleavage but Serves to Couple Indirect. Readout to Catalysis

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12 December 2020

Evidence for mutations that break communication between the Endo and Topo domains in NaeI endonuclease/topoisomerase

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12 December 2020

Does BcgI, a unique restriction endonuclease, require two recognition sites for cleavage?

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12 December 2020

Stimulation of homologous recombination through targeted cleavage by chimeric nucleases

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12 December 2020

RecA-AC: single-site cleavage of plasmids and chromosomes at any predetermined restriction site

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12 December 2020

Type I restriction systems: sophisticated molecular machines (a legacy of Bertani and Weigle)

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12 December 2020

Homing endonucleases: keeping the house in order

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12 December 2020

Modified DNA fragments activate NaeI cleavage of refractory DNA sites

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12 December 2020

Understanding the immutability of restriction enzymes: crystal structure of BglII and its DNA substrate at 1.5 A resolution

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12 December 2020

[N.BstSE--a site-specific nickase from Bacillus stearothermophilus SE-589]

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12 December 2020

EcoRV restriction endonuclease: communication between catalytic metal ions and DNA recognition

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12 December 2020

High-specificity DNA cleavage agent: design and application to kilobase and megabase DNA substrates

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12 December 2020

Structure and function of type II restriction endonucleases

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12 December 2020

The energetics of the interaction of BamHI endonuclease with its recognition site GGATCC.

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12 December 2020

The nicking endonuclease N.BstNBI is closely related to type IIs restriction endonucleases MlyI and PleI

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12 December 2020

DNA cleavage reactions by type II restriction enzymes that require two copies of their recognition sites

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12 December 2020

Use of specific oligonucleotide duplexes to stimulate cleavage of refractory DNA sites by restriction endonucleases

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12 December 2020

Cloning and analysis of the four genes coding for Bpu10I restriction-modification enzymes

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12 December 2020

Crystal structure of NaeI--an evolutionary bridge between DNA endonuclease and topoisomerase

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12 December 2020

Cooperative binding properties of restriction endonuclease EcoRII with DNA recognition sites.

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12 December 2020

Minimum duplex requirements for restriction enzyme cleavage near the termini of linear DNA fragments

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12 December 2020

Type III restriction endonucleases translocate DNA in a reaction driven by recognition site-specific ATP hydrolysis

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12 December 2020

A detailed study of the substrate specificity of a chimeric restriction enzyme.

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12 December 2020

The energetic basis of specificity in the Eco RI endonuclease--DNA interaction.

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12 December 2020

The significance of distance and orientation of restriction endonuclease recognition sites in viral DNA genomes.

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12 December 2020

Characterization of the specific DNA nicking activity of restriction endonuclease N.BstNBI.

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12 December 2020

Diversity of restriction-modification gene homologues in Helicobacter pylori.

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12 December 2020

Requirements for double-strand cleavage by chimeric restriction enzymes with zinc finger DNA-recognition domains

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12 December 2020

Evolutionary role of restriction/modification systems as revealed by comparative genome analysis

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12 December 2020

XcmI as a universal restriction enzyme for single-stranded DNA.

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12 December 2020

Towards the design of rare cutting restriction endonucleases: using directed evolution to generate variants of EcoRV differing in their substrate specificity by two orders of magnitude

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12 December 2020

Crystallographic snapshots along a protein-induced DNA-bending pathway

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12 December 2020

Restriction and modification systems of Neisseria gonorrhoeae.

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12 December 2020

Cloning, expression, and purification of a thermostable nonhomodimeric restriction enzyme, BslI.

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12 December 2020

Ability of DNA and spermidine to affect the activity of restriction endonucleases from several bacterial species

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12 December 2020

The SfiI restriction endonuclease makes a four-strand DNA break at two copies of its recognition sequence

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12 December 2020

Linkage of EcoRI dissociation from its specific DNA recognition site to water activity, salt concentration, and pH: separating their roles in specific and non-specific binding.

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12 December 2020

Activation of restriction endonuclease EcoRII does not depend on the cleavage of stimulator DNA.

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12 December 2020

Purification of restriction endonuclease from Acetobacter aceti IFO 3281 (AatII) and its properties

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12 December 2020

Identification of a base-specific contact between the restriction endonuclease SsoII and its recognition sequence by photocross-linking

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12 December 2020

Protein engineering of the restriction endonuclease EcoRV . Structure-guided design of enzyme variants that recognize the base pairs flanking the recognition site

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12 December 2020

Recognition and cleavage of DNA by type-II restriction endonucleases

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12 December 2020

Protein engineering of the restriction endonuclease EcoRV: replacement of an amino acid residue in the DNA binding site leads to an altered selectivity towards unmodified and modified substrates

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12 December 2020

Substrate DNA and cofactor regulate the activities of a multi-functional restriction-modification enzyme, BcgI.

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12 December 2020

Changes in solvation during DNA binding and cleavage are critical to altered specificity of the EcoRI endonuclease

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12 December 2020

Step-wise DNA relaxation and decatenation by NaeI-43K.

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12 December 2020

Identifiers

DOI

10.1385/MB:23:3:225

1 reference

PubMed ID

12665693

Dimensions Publication ID

31 July 2017

0 references

1 reference

PubMed ID

12665693