(Q34220619)

31 July 2017

title

Quality-score refinement of SSU rRNA gene pyrosequencing differs across gene region for environmental samples (English)

1 reference

31 July 2017

1 reference

Kara Bowen De León

1

1 reference

31 July 2017

Bradley D Ramsay

series ordinal

2

1 reference

31 July 2017

Matthew W Fields

series ordinal

3

1 reference

31 July 2017

publication date

5 April 2012

1 reference

31 July 2017

1 reference

31 July 2017

volume

64

1 reference

31 July 2017

issue

2

1 reference

31 July 2017

page(s)

499-508

1 reference

https://scigraph.springernature.com/pub.10.1007/s00248-012-0043-9

31 July 2017

exact match

0 references

cites work

Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Accurate determination of microbial diversity from 454 pyrosequencing data

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Bacterial community succession during in situ uranium bioremediation: spatial similarities along controlled flow paths

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Accurate taxonomy assignments from 16S rRNA sequences produced by highly parallel pyrosequencers

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Species richness in soil bacterial communities: a proposed approach to overcome sample size bias

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Accuracy and quality of massively parallel DNA pyrosequencing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

454 sequencing put to the test using the complex genome of barley

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Microbial diversity in the deep sea and the underexplored "rare biosphere"

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Genome sequencing in microfabricated high-density picolitre reactors

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

DNA recovery from soils of diverse composition.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Short pyrosequencing reads suffice for accurate microbial community analysis

5 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00248-012-0043-9

Confidence intervals of similarity values determined for cloned SSU rRNA genes from environmental samples.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1007%2FS00248-012-0043-9

Massively parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3391548

Compilation of small ribosomal subunit RNA sequences

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22476815

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Insidious effects of sequencing errors on perceived diversity in molecular surveys

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22476815

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1007/S00248-012-0043-9

1 reference

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference