(Q34247778)

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Amino acid function and docking site prediction through combining disease variants, structure alignments, sequence alignments, and molecular dynamics: a study of the HMG domain

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Europe PubMed Central

PubMed publication ID

31 July 2017

Amino acid function and docking site prediction through combining disease variants, structure alignments, sequence alignments, and molecular dynamics: a study of the HMG domain (English)

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

sequence alignment

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based on heuristic

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author name string

Jeremy W Prokop

1

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Thomas C Leeper

2

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Zhong-Hui Duan

3

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

Amy Milsted

4

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Europe PubMed Central

PubMed publication ID

31 July 2017

language of work or name

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publication date

13 March 2012

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Europe PubMed Central

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31 July 2017

BMC Bioinformatics

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Europe PubMed Central

PubMed publication ID

31 July 2017

13 Suppl 2

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Europe PubMed Central

PubMed publication ID

31 July 2017

S3

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Europe PubMed Central

PubMed publication ID

31 July 2017

copyright license

Creative Commons Attribution 2.0 Generic

13 March 2012

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April 2022 Public Data File from Crossref

copyright status

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I-TASSER: a unified platform for automated protein structure and function prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Review of the Y chromosome, Sry and hypertension

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Regulation of monoamine oxidase A by the SRY gene on the Y chromosome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Delivery of sry1, but not sry2, to the kidney increases blood pressure and sns indices in normotensive wky rats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

SOX9 is expressed in normal prostate basal cells and regulates androgen receptor expression in prostate cancer cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

MUSTANG: a multiple structural alignment algorithm.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Regulation of tyrosine hydroxylase gene transcription by Sry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

The role of the C-terminal extension (CTE) of the estrogen receptor alpha and beta DNA binding domain in DNA binding and interaction with HMGB.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

A point-charge force field for molecular mechanics simulations of proteins based on condensed-phase quantum mechanical calculations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Multiple sequence alignment with the Clustal series of programs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

SRY interacts with and negatively regulates androgen receptor transcriptional activity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Functional and structural studies of wild type SOX9 and mutations causing campomelic dysplasia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

HMG-1 as a late mediator of endotoxin lethality in mice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

The DNA-binding specificity of SOX9 and other SOX proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

High-mobility group chromatin proteins 1 and 2 functionally interact with steroid hormone receptors to enhance their DNA binding in vitro and transcriptional activity in mammalian cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Expression of high-mobility group-1 mRNA in human gastrointestinal adenocarcinoma and corresponding non-cancerous mucosa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

HMG domain proteins: architectural elements in the assembly of nucleoprotein structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

A gene mapping to the sex-determining region of the mouse Y chromosome is a member of a novel family of embryonically expressed genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Androgen receptor and the testes influence hypertension in a hybrid rat model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Amino acid substitution matrices from protein blocks

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3402923

6 July 2018

Identifiers

10.1186/1471-2105-13-S2-S3

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

DBLP publication ID

journals/bmcbi/ProkopLDM12

1 reference

DBLP Dataset 2021-01-02

28 January 2021

Dimensions Publication ID

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

31 July 2017

ResearchGate publication ID

0 references

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