(Q34285226)

1 August 2017

title

Biochemical characterization of the transcriptional regulator BzdR from Azoarcus sp. CIB (English)

1 reference

Gonzalo Durante-Rodríguez

1 August 2017

author

0 references

Manuel Carmona

0 references

author name string

Gonzalo Durante-Rodríguez

1

1 reference

1 August 2017

J Andrés Valderrama

2

1 reference

1 August 2017

José Miguel Mancheño

3

1 reference

1 August 2017

Germán Rivas

4

1 reference

1 August 2017

Carlos Alfonso

5

1 reference

1 August 2017

Ernesto Arias-Palomo

6

1 reference

1 August 2017

Oscar Llorca

7

1 reference

1 August 2017

José Luis García

8

1 reference

1 August 2017

Eduardo Díaz

9

1 reference

1 August 2017

Manuel Carmona

10

1 reference

1 August 2017

language of work or name

English

0 references

publication date

8 September 2010

1 reference

Journal of Biological Chemistry

1 August 2017

published in

1 reference

1 August 2017

volume

285

1 reference

1 August 2017

issue

46

1 reference

1 August 2017

page(s)

35694-35705

1 reference

3-Hydroxyphenylpropionate and phenylpropionate are synergistic activators of the MhpR transcriptional regulator from Escherichia coli

1 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Anaerobic catabolism of aromatic compounds: a genetic and genomic view.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

The Jpred 3 secondary structure prediction server

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Inference of macromolecular assemblies from crystalline state

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Bsoft: image processing and molecular modeling for electron microscopy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Oligomeric assemblies of the Escherichia coli MalT transcriptional activator revealed by cryo-electron microscopy and image processing

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

XMIPP: a new generation of an open-source image processing package for electron microscopy.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

The bzd gene cluster, coding for anaerobic benzoate catabolism, in Azoarcus sp. strain CIB

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

UCSF Chimera--a visualization system for exploratory research and analysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Analysis of heterogeneous interactions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Cleaning up with genomics: applying molecular biology to bioremediation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Benzoate decreases the binding of cis,cis-muconate to the BenM regulator despite the synergistic effect of both compounds on transcriptional activation.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Accurate determination of local defocus and specimen tilt in electron microscopy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Retroevolution of lambda Cro toward a stable monomer

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Genes coding for a new pathway of aerobic benzoate metabolism in Azoarcus evansii

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Metabolic diversity in aromatic compound utilization by anaerobic microbes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Crystal structure of shikimate kinase from Mycobacterium tuberculosis reveals the dynamic role of the LID domain in catalysis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Analysis of interaction of regulatory protein TyrR with DNA.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Size-Distribution Analysis of Macromolecules by Sedimentation Velocity Ultracentrifugation and Lamm Equation Modeling

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Projection structure of a transcriptional regulator, HupR, determined by electron cryo-microscopy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

EMAN: semiautomated software for high-resolution single-particle reconstructions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Situs: A package for docking crystal structures into low-resolution maps from electron microscopy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

An evolutionary link between sporulation and prophage induction in the structure of a repressor:anti-repressor complex

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

The Bacillus subtilis regulator SinR inhibits spoIIG promoter transcription in vitro without displacing RNA polymerase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Recognition of DNA structure by 434 repressor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Structural classification of HTH DNA-binding domains and protein-DNA interaction modes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Activation of transcription at sigma 54-dependent promoters on linear templates requires intrinsic or induced bending of the DNA

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Self-assembly of bacteriophage lambda cI repressor: effects of single-site mutations on the monomer-dimer equilibrium

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Movie of the structural changes during a catalytic cycle of nucleoside monophosphate kinases

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

57 Sequencing end-labeled DNA with base-specific chemical cleavages

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Dimerization of the operator binding domain of phage lambda repressor.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

The Q-linker: a class of interdomain sequences found in bacterial multidomain regulatory proteins.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Basic local alignment search tool

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

The P-loop--a common motif in ATP- and GTP-binding proteins

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

A family of regulatory genes associated with type II restriction-modification systems

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

The Bacillus subtilis sin gene, a regulator of alternate developmental processes, codes for a DNA-binding protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Fnr mutants that activate gene expression in the presence of oxygen

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Cloning of a Factor Required for Activity of the Ah (Dioxin) Receptor

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Crystal structure of NAD-dependent formate dehydrogenase

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Autoregulation and function of a repressor in bacteriophage lambda

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

The biological uses and importance of glutaraldehyde

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Degradation of purines and pyrimidines by microorganisms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Sequence of cro gene of bacteriophage lambda

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

Aromatic amino acid biosynthesis: regulation of shikimate kinase in Escherichia coli K-12

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2975194

New insights into the BzdR-mediated transcriptional regulation of the anaerobic catabolism of benzoate in Azoarcus sp. CIB.

6 July 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

BzdR, a repressor that controls the anaerobic catabolism of benzoate in Azoarcus sp. CIB, is the first member of a new subfamily of transcriptional regulators

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

Flow cytometric analysis of microorganisms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

Cloning allergens via phage display

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

Macromolecular crowding accelerates amyloid formation by human apolipoprotein C-II.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

Structural basis of lipid biosynthesis regulation in Gram-positive bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

Enriching the sequence substitution matrix by structural information.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

The linker region plays an important role in the interdomain communication of the response regulator OmpR.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

Multi-resolution contour-based fitting of macromolecular structures

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

Homology among DNA-binding proteins suggests use of a conserved super-secondary structure

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.143503

An investigation of oligopeptides linking domains in protein tertiary structures and possible candidates for general gene fusion

21 January 2018

1 reference

12 December 2020

[NAD-dependent formate dehydrogenase of methylotrophic bacteria Pseudomonas sp. 101: cloning, expression, and study of the genetic structure]

1 reference

12 December 2020

Fluorescence anisotropy of tyrosine using one-and two-photon excitation

1 reference

12 December 2020

The three-dimensional structure of shikimate kinase

1 reference

12 December 2020

Characterization of heterologous protein-protein interactions using analytical ultracentrifugation

1 reference

12 December 2020

High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila

1 reference

12 December 2020

Crystal structure of Mycobacterium tuberculosis shikimate kinase in complex with shikimic acid and an ATP analogue

1 reference

12 December 2020

Identifiers

DOI

10.1074/JBC.M110.143503

1 reference

1 August 2017

1 reference

1 August 2017

1 reference