Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q34296246)
Watch
English
Asynchronous replica exchange for molecular simulations
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
title
Asynchronous replica exchange for molecular simulations
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
author
Emilio Gallicchio
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
author name string
Ronald M Levy
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
Manish Parashar
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
publication date
1 April 2008
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
published in
Journal of Computational Chemistry
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
volume
29
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
issue
5
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
page(s)
788-794
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
cites work
Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
Serial replica exchange
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
The midpoint method for parallelization of particle simulations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
Conformational equilibrium of cytochrome P450 BM-3 complexed with N-palmitoylglycine: a replica exchange molecular dynamics study
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
Integrated Modeling Program, Applied Chemical Theory (IMPACT)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
The Amber biomolecular simulation programs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
Replica exchange with solute tempering: a method for sampling biological systems in explicit water
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
Protein folding pathways from replica exchange simulations and a kinetic network model
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
Multiplexed-replica exchange molecular dynamics method for protein folding simulation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
The free energy landscape for beta hairpin folding in explicit water
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
6 July 2018
Automatic discovery of metastable states for the construction of Markov models of macromolecular conformational dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
28 October 2018
Temperature weighted histogram analysis method, replica exchange, and transition paths.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
28 October 2018
Replica-exchange extensions of simulated tempering method.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
28 October 2018
Free energy surfaces of beta-hairpin and alpha-helical peptides generated by replica exchange molecular dynamics with the AGBNP implicit solvent model
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
28 October 2018
Atomic simulations of protein folding, using the replica exchange algorithm.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
28 October 2018
AGBNP: an analytic implicit solvent model suitable for molecular dynamics simulations and high-resolution modeling.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
28 October 2018
Replica Monte Carlo simulation of spin glasses.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2977925
retrieved
28 October 2018
A Novel Hamiltonian Replica Exchange MD Protocol to Enhance Protein Conformational Space Sampling
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/17876761
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1002/JCC.20839
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
DBLP publication ID
journals/jcc/GallicchioLP08
1 reference
stated in
DBLP Dataset 2021-01-02
retrieved
28 January 2021
PMC publication ID
2977925
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
PubMed publication ID
17876761
1 reference
stated in
Europe PubMed Central
PMC publication ID
2977925
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17876761%20AND%20SRC:MED&resulttype=core&format=json
retrieved
7 January 2020
ResearchGate publication ID
5965790
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit