(Q34316432)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

title

Structural basis for transcription regulation by alarmone ppGpp (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

guanosine tetraphosphate binding

27 December 2019

main subject

1 reference

Gene Ontology release 2020-05-02

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Shigeyuki Yokoyama

7

1 reference

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27 December 2019

author name string

Vsevolod Patlan

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Marina N Vassylyeva

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Takeshi Hosaka

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Kozo Ochi

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Dmitry G Vassylyev

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

Irina Artsimovitch

1

1 reference

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27 December 2019

language of work or name

English

0 references

publication date

1 April 2004

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

volume

117

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

page(s)

299-310

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

issue

3

1 reference

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Pausing by bacterial RNA polymerase is mediated by mechanistically distinct classes of signals

27 December 2019

cites work

1 reference

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7 January 2021

The transcriptional regulator RfaH stimulates RNA chain synthesis after recruitment to elongation complexes by the exposed nontemplate DNA strand.

1 reference

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7 January 2021

Co-overexpression of Escherichia coli RNA polymerase subunits allows isolation and analysis of mutant enzymes lacking lineage-specific sequence insertions

1 reference

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7 January 2021

Mechanism of regulation of transcription initiation by ppGpp. II. Models for positive control based on properties of RNAP mutants and competition for RNAP.

1 reference

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7 January 2021

Mechanism of regulation of transcription initiation by ppGpp. I. Effects of ppGpp on transcription initiation in vivo and in vitro

1 reference

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7 January 2021

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

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7 January 2021

The mediator for stringent control, ppGpp, binds to the beta-subunit of Escherichia coli RNA polymerase.

1 reference

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7 January 2021

The study of guanosine 5'-diphosphate 3'-diphosphate-mediated transcription regulation in vitro using a coupled transcription-translation system.

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7 January 2021

Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution

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7 January 2021

Mutations that render the promoter of the histidine operon of Salmonella typhimurium insensitive to nutrient-rich medium repression and amino acid downshift

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7 January 2021

Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 A resolution

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7 January 2021

Further additions to MolScript version 1.4, including reading and contouring of electron-density maps

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7 January 2021

The supercoiling sensitivity of a bacterial tRNA promoter parallels its responsiveness to stringent control

1 reference

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7 January 2021

Synthesis of the stationary-phase sigma factor sigma s is positively regulated by ppGpp

1 reference

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7 January 2021

Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution

1 reference

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7 January 2021

Regulation of sigma factor competition by the alarmone ppGpp

1 reference

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7 January 2021

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

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7 January 2021

Essential steps in the ppGpp-dependent regulation of bacterial ribosomal RNA promoters can be explained by substrate competition

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7 January 2021

Swiss-PDB Viewer (Deep View).

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7 January 2021

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

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7 January 2021

Transcriptional pausing of RNA polymerase in the presence of guanosine tetraphosphate depends on the promoter and gene sequence.

1 reference

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7 January 2021

Genetically separable functional elements mediate the optimal expression and stringent regulation of a bacterial tRNA gene.

1 reference

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7 January 2021

The role of the alarmone (p)ppGpp in sigma N competition for core RNA polymerase.

1 reference

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7 January 2021

Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression

1 reference

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7 January 2021

Structural organization of bacterial RNA polymerase holoenzyme and the RNA polymerase-promoter open complex

1 reference

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7 January 2021

Purine nucleotide pyrophosphotransferase from Streptomyces morookaensis, capable of synthesizing pppApp and pppGpp

1 reference

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7 January 2021

Processing of X-ray diffraction data collected in oscillation mode

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7 January 2021

Alteration of stringent response of the Escherichia coli rnpB promoter by mutations in the -35 region.

1 reference

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7 January 2021

Multiple mechanisms of transcription inhibition by ppGpp at the lambdap(R) promoter

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7 January 2021

Unified two-metal mechanism of RNA synthesis and degradation by RNA polymerase

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7 January 2021

A mechanism for all polymerases

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7 January 2021

A general two-metal-ion mechanism for catalytic RNA

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7 January 2021

Structure of a T7 RNA polymerase elongation complex at 2.9 A resolution

1 reference

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7 January 2021

Binding of the transcription effector ppGpp to Escherichia coli RNA polymerase is allosteric, modular, and occurs near the N terminus of the beta'-subunit

1 reference

https://api.crossref.org/works/10.1016%2FS0092-8674%2804%2900401-5

7 January 2021

ppApp alters transcriptional selectivity ofEscherichia coliRNA polymerase

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7 January 2021

Conserved features of coordinately regulatedE.colipromoters

1 reference

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7 January 2021

Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 A resolution

1 reference

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7 January 2021

Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme fromThermus thermophilus

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7 January 2021

A recombinant RNA polymerase II-like enzyme capable of promoter-specific transcription

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7 January 2021

Structural basis for the transition from initiation to elongation transcription in T7 RNA polymerase

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7 January 2021

The signal for growth rate control and stringent sensitivity in E. coli is not restricted to a particular sequence motif within the promoter region

1 reference

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7 January 2021

Crystal structure of Thermus aquaticus core RNA polymerase at 3.3 A resolution.

1 reference

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7 January 2021

10.1016/S0092-8674(04)00401-5

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15109491%20AND%20SRC:MED&resulttype=core&format=json

27 December 2019

1 reference