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The mechanism of RNA binding to TRAP: initiation and cooperative interactions.
scientific article
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scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
title
The mechanism of RNA binding to TRAP: initiation and cooperative interactions
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
author
Philip A. Gottlieb
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
author name string
M B Elliott
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
P Gollnick
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
language of work or name
English
0 references
publication date
1 January 2001
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
published in
RNA
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
volume
7
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
issue
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
page(s)
85-93
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
cites work
A Bacillus subtilis gene of previously unknown function, yhaG, is translationally regulated by tryptophan-activated TRAP and appears to be involved in tryptophan transport.
1 reference
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PubMed Central
reference URL
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A Bacillus subtilis operon containing genes of unknown function senses tRNATrp charging and regulates expression of the genes of tryptophan biosynthesis
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Probing the TRAP-RNA interaction with nucleoside analogs
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6 July 2018
Structure of the trp RNA-binding attenuation protein, TRAP, bound to RNA
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PubMed Central
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6 July 2018
Regulatory features of the trp operon and the crystal structure of the trp RNA-binding attenuation protein from Bacillus stearothermophilus
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6 July 2018
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
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Moieties in an RNA promoter specifically recognized by a viral RNA-dependent RNA polymerase
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6 July 2018
The trp RNA-binding attenuation protein (TRAP) from Bacillus subtilis binds to unstacked trp leader RNA.
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6 July 2018
Interaction of the trp RNA-Binding attenuation protein (TRAP) of Bacillus subtilis with RNA: effects of the number of GAG repeats, the nucleotides separating adjacent repeats, and RNA secondary structure
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PubMed Central
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6 July 2018
Kinetic and thermodynamic analysis of the interaction between TRAP (trp RNA-binding attenuation protein) of Bacillus subtilis and trp leader RNA.
1 reference
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PubMed Central
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6 July 2018
Thermodynamic and alkylation interference analysis of the lac repressor-operator substituted with the analogue 7-deazaguanine
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Regulation of the Bacillus subtilis trp operon by an RNA-binding protein
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6 July 2018
The structure of trp RNA-binding attenuation protein
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6 July 2018
trp RNA-binding attenuation protein (TRAP)-trp leader RNA interactions mediate translational as well as transcriptional regulation of the Bacillus subtilis trp operon.
1 reference
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PubMed Central
reference URL
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6 July 2018
TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a toroid-shaped molecule that binds transcripts containing GAG or UAG repeats separated by two nucleotides
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370072
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6 July 2018
Translation of trpG in Bacillus subtilis is regulated by the trp RNA-binding attenuation protein (TRAP).
1 reference
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PubMed Central
reference URL
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6 July 2018
TRAP, the trp RNA-binding attenuation protein of Bacillus subtilis, is a multisubunit complex that appears to recognize G/UAG repeats in the trpEDCFBA and trpG transcripts.
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6 July 2018
Using modified nucleotides to map the DNA determinants of the Tus-TerB complex, the protein-DNA interaction associated with termination of replication in Escherichia coli
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6 July 2018
cis-acting sites in the transcript of the Bacillus subtilis trp operon regulate expression of the operon
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PubMed Central
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6 July 2018
The energetic basis of specificity in the Eco RI endonuclease--DNA interaction.
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6 July 2018
An apparent Bacillus subtilis folic acid biosynthetic operon containing pab, an amphibolic trpG gene, a third gene required for synthesis of para-aminobenzoic acid, and the dihydropteroate synthase gene
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6 July 2018
trp RNA-binding attenuation protein-mediated long distance RNA refolding regulates translation of trpE in Bacillus subtilis
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Relationships between apparent binding energies measured in site-directed mutagenesis experiments and energetics of binding and catalysis
1 reference
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retrieved
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based on heuristic
inferred from PubMed ID database lookup
Functional contacts of a transfer RNA synthetase with 2′-hydroxyl groups in the RNA minor groove
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/11214184
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Interactions between the trp repressor and its operator sequence as studied by base analog substitution
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/11214184
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The role of 2'-hydroxyl groups in an RNA-protein interaction
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/11214184
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Alanine-scanning mutagenesis of Bacillus subtilis trp RNA-binding attenuation protein (TRAP) reveals residues involved in tryptophan binding and RNA binding
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/11214184
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
RNA structure inhibits the TRAP (trp RNA-binding attenuation protein)-RNA interaction
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/11214184
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1017/S135583820100173X
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
PMC publication ID
1370072
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
PubMed publication ID
11214184
1 reference
stated in
Europe PubMed Central
PMC publication ID
1370072
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11214184%20AND%20SRC:MED&resulttype=core&format=json
retrieved
4 November 2019
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