(Q34368335)

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Expression of the human RNA-binding protein HuR in Trypanosoma brucei increases the abundance of mRNAs containing AU-rich regulatory elements

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Europe PubMed Central

PubMed publication ID

1 August 2017

Expression of the human RNA-binding protein HuR in Trypanosoma brucei increases the abundance of mRNAs containing AU-rich regulatory elements (English)

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Europe PubMed Central

PubMed publication ID

1 August 2017

Trypanosoma brucei

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RNA-binding proteins

1 reference

based on heuristic

inferred from title

Henriette Irmer

5

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author name string

Luis Quijada

1

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Europe PubMed Central

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1 August 2017

Cristina Guerra-Giraldez

2

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Europe PubMed Central

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1 August 2017

Maciej Drozdz

3

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Europe PubMed Central

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1 August 2017

Claudia Hartmann

4

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Europe PubMed Central

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1 August 2017

Claudia Ben-Dov

6

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Europe PubMed Central

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1 August 2017

Marina Cristodero

7

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Europe PubMed Central

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1 August 2017

Martina Ding

8

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Europe PubMed Central

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1 August 2017

Christine Clayton

9

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1 August 2017

language of work or name

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publication date

1 October 2002

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Europe PubMed Central

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1 August 2017

Nucleic Acids Research

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Europe PubMed Central

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1 August 2017

30

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Europe PubMed Central

PubMed publication ID

1 August 2017

20

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Europe PubMed Central

PubMed publication ID

1 August 2017

4414-4424

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Europe PubMed Central

PubMed publication ID

1 August 2017

describes a project that uses

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Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC137141/fullTextXML

based on heuristic

inferred from PubMed Central ID database lookup

Analysis of stage-specific gene expression in the bloodstream and the procyclic form of Trypanosoma brucei using a genomic DNA-microarray

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Life without transcriptional control? From fly to man and back again

1 reference

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6 July 2018

A common mechanism of stage-regulated gene expression in Leishmania mediated by a conserved 3'-untranslated region element.

1 reference

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6 July 2018

The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

A novel CCCH protein which modulates differentiation of Trypanosoma brucei to its procyclic form

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

AU binding proteins recruit the exosome to degrade ARE-containing mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Degradation of the unstable EP1 mRNA in Trypanosoma brucei involves initial destruction of the 3'-untranslated region

1 reference

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6 July 2018

Characterisation of the growth and differentiation in vivo and in vitro-of bloodstream-form Trypanosoma brucei strain TREU 927.

1 reference

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6 July 2018

Structural basis for recognition of AU-rich element RNA by the HuD protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

The identification of an endonuclease that cleaves within an HuR binding site in mRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

A novel selection regime for differentiation defects demonstrates an essential role for the stumpy form in the life cycle of the African trypanosome.

1 reference

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6 July 2018

mRNA stability in eukaryotes

1 reference

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6 July 2018

AU-rich elements in the 3'-untranslated region of a new mucin-type gene family of Trypanosoma cruzi confers mRNA instability and modulates translation efficiency

1 reference

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6 July 2018

Single-stranded-RNA binding proteins

1 reference

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6 July 2018

Genetic manipulation of kinetoplastida

1 reference

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6 July 2018

Developments in the differentiation of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Leishmania major Friedlin chromosome 1 has an unusual distribution of protein-coding genes

1 reference

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6 July 2018

ELAV proteins stabilize deadenylated intermediates in a novel in vitro mRNA deadenylation/degradation system

1 reference

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6 July 2018

Compartmentation of phosphoglycerate kinase in Trypanosoma brucei plays a critical role in parasite energy metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Functional and molecular characterization of a glycosomal PPi-dependent enzyme in trypanosomatids: pyruvate, phosphate dikinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

RNA stabilization by the AU-rich element binding protein, HuR, an ELAV protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Unravelling the procyclin coat of Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Position-dependent and promoter-specific regulation of gene expression in Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

The bloodstream differentiation-division of Trypanosoma brucei studied using mitochondrial markers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Mechanisms of developmental regulation in Trypanosoma brucei: a polypyrimidine tract in the 3'-untranslated region of a surface protein mRNA affects RNA abundance and translation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Identification of HuR as a protein implicated in AUUUA-mediated mRNA decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Antigenic variation in trypanosomes: secrets surface slowly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Polysomal, procyclin mRNAs accumulate in bloodstream forms of monomorphic and pleomorphic trypanosomes treated with protein synthesis inhibitors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Effects of aphidicolin and hydroxyurea on the cell cycle and differentiation of Trypanosoma brucei bloodstream forms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Functional characterization of a non-AUUUA AU-rich element from the c-jun proto-oncogene mRNA: evidence for a novel class of AU-rich elements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Cloning and characterization of HuR, a ubiquitously expressed Elav-like protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

The PARP promoter of Trypanosoma brucei is developmentally regulated in a chromosomal context.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

AU-rich elements: characterization and importance in mRNA degradation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Temporal order of RNA-processing reactions in trypanosomes: rapid trans splicing precedes polyadenylation of newly synthesized tubulin transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Differential response to RNA trans-splicing signals within the phosphoglycerate kinase gene cluster in Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Gene expression mediated by bacteriophage T3 and T7 RNA polymerases in transgenic trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

mRNA decay mediated by two distinct AU-rich elements from c-fos and granulocyte-macrophage colony-stimulating factor transcripts: different deadenylation kinetics and uncoupling from translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

The cell division cycle of Trypanosoma brucei brucei: timing of event markers and cytoskeletal modulations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Inhibition of protein synthesis results in super-induction of procyclin (PARP) RNA levels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

The 7SL RNA homologue of Trypanosoma brucei is closely related to mammalian 7SL RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

6 July 2018

Trypanosoma brucei expression-site-associated-gene-8 protein interacts with a Pumilio family protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

TcUBP-1, a developmentally regulated U-rich RNA-binding protein involved in selective mRNA destabilization in trypanosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

Regulated ARE-mediated mRNA decay in Saccharomyces cerevisiae

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

In-vitro competition analysis of procyclin gene and variant surface glycoprotein gene expression site transcription in Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

Structure of a regulatory 3' untranslated region from Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

An unambiguous nomenclature for the major surface glycoproteins of the procyclic form of Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

Contributions of the procyclin 3' untranslated region and coding region to the regulation of expression in bloodstream forms of Trypanosoma brucei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

Purification and properties of HuD, a neuronal RNA-binding protein.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

The 3'-untranslated regions from the Trypanosoma brucei phosphoglycerate kinase-encoding genes mediate developmental regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=137141

27 October 2018

A common pyrimidine-rich motif governs trans-splicing and polyadenylation of tubulin polycistronic pre-mRNA in trypanosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/12384588

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

AUF1 binding affinity to A+U-rich elements correlates with rapid mRNA degradation

1 reference

https://pubmed.ncbi.nlm.nih.gov/12384588

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of multiple downstream splice sites on polyadenylation in Trypanosoma brucei

1 reference

https://pubmed.ncbi.nlm.nih.gov/12384588

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Differential regulation of ESAG transcripts in Trypanosoma brucei

1 reference

https://pubmed.ncbi.nlm.nih.gov/12384588

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vectors for inducible expression of toxic gene products in bloodstream and procyclic Trypanosoma brucei

1 reference

https://pubmed.ncbi.nlm.nih.gov/12384588

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKF577

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

1 August 2017

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