(Q34372764)

1 August 2017

1 reference

8 April 2021

Information theory applications for biological sequence analysis (English)

1 reference

24058049

1 August 2017

main subject

computational biology

1 reference

8 April 2021

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24058049%20AND%20SRC:MED&resulttype=core&format=json

14 June 2020

publication date

20 September 2013

1 reference

24058049

Briefings in Bioinformatics

1 August 2017

1 May 2014

1 reference

8 April 2021

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24058049%20AND%20SRC:MED&resulttype=core&format=json

14 June 2020

8 April 2021

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24058049%20AND%20SRC:MED&resulttype=core&format=json

14 June 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24058049%20AND%20SRC:MED&resulttype=core&format=json

14 June 2020

page(s)

376-389

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24058049%20AND%20SRC:MED&resulttype=core&format=json

The performances of the chi-square test and complexity measures for signal recognition in biological sequences

14 June 2020

cites work

1 reference

12 December 2020

Complexity: an internet resource for analysis of DNA sequence complexity

1 reference

12 December 2020

Textual data compression in computational biology: a synopsis

1 reference

12 December 2020

Gene mapping and marker clustering using Shannon's mutual information.

1 reference

12 December 2020

Local Renyi entropic profiles of DNA sequences

1 reference

12 December 2020

High statistics block entropy measures of DNA sequences.

1 reference

12 December 2020

The method to compare nucleotide sequences based on the minimum entropy principle

1 reference

12 December 2020

DNA binding sites: representation and discovery

1 reference

12 December 2020

MISCORE: a new scoring function for characterizing DNA regulatory motifs in promoter sequences

1 reference

12 December 2020

Topological entropy of DNA sequences

1 reference

12 December 2020

Isomorphism between cell and human languages: molecular biological, bioinformatic and linguistic implications.

1 reference

12 December 2020

The information content of DNA

1 reference

12 December 2020

A novel alignment-free method for comparing transcription factor binding site motifs

1 reference

12 December 2020

An analysis of information content present in protein-DNA interactions

1 reference

12 December 2020

Sequence complexity profiles of prokaryotic genomic sequences: a fast algorithm for calculating linguistic complexity

1 reference

12 December 2020

Beyond DNA: integrating inclusive inheritance into an extended theory of evolution

1 reference

12 December 2020

Sequence complexity and DNA curvature

1 reference

12 December 2020

Chaos game representation of gene structure

1 reference

12 December 2020

Automated splicing mutation analysis by information theory.

1 reference

12 December 2020

Alignment-free sequence comparison-a review

1 reference

12 December 2020

The study of correlation structures of DNA sequences: a critical review.

1 reference

12 December 2020

Scaling properties and fractality in the distribution of coding segments in eukaryotic genomes revealed through a block entropy approach

1 reference

12 December 2020

Information content of binding sites on nucleotide sequences

1 reference

12 December 2020

Species independence of mutual information in coding and noncoding DNA

1 reference

12 December 2020

An information transmission model for transcription factor binding at regulatory DNA sites

1 reference

12 December 2020

Entropic profiles of DNA sequences through chaos-game-derived images

1 reference

12 December 2020

Pattern matching through Chaos Game Representation: bridging numerical and discrete data structures for biological sequence analysis

1 reference

12 December 2020

Entropy-based information gain approaches to detect and to characterize gene-gene and gene-environment interactions/correlations of complex diseases

1 reference

12 December 2020

Entropic Profiler - detection of conservation in genomes using information theory

1 reference

12 December 2020

Entropy and complexity of finite sequences as fluctuating quantities.

1 reference

12 December 2020

Discovering patterns in Plasmodium falciparum genomic DNA.

1 reference

12 December 2020

The information content of DNA and evolution

1 reference

12 December 2020

Shannon information in complete genomes

1 reference

12 December 2020

A new sequence distance measure for phylogenetic tree construction

1 reference

12 December 2020

Quantum mechanical model for information transfer from DNA to protein

1 reference

12 December 2020

Linguistic features of noncoding DNA sequences.

1 reference

12 December 2020

Information-theoretic approaches to SVM feature selection for metagenome read classification.

1 reference

12 December 2020

Sequence space coverage, entropy of genomes and the potential to detect non-human DNA in human samples

1 reference

12 December 2020

Rényi continuous entropy of DNA sequences

1 reference

12 December 2020

The mutual information theory for the certification of rice coding sequences

1 reference

12 December 2020

Divergence and Shannon Information in Genomes

1 reference

12 December 2020

Applying Shannon's information theory to bacterial and phage genomes and metagenomes

1 reference

12 December 2020

Study of DNA binding sites using the Rényi parametric entropy measure

1 reference

12 December 2020

Information-theoretic model of evolution over protein communication channel.

1 reference

12 December 2020

A probabilistic measure for alignment-free sequence comparison

1 reference

12 December 2020

Dinucleotide relative abundance extremes: a genomic signature

1 reference

12 December 2020

Computing distribution of scale independent motifs in biological sequences

1 reference

12 December 2020

Examining coding structure and redundancy in DNA. How does DNA protect itself from life's uncertainty?

1 reference

12 December 2020

Information content of protein sequences

1 reference

12 December 2020

Significantly lower entropy estimates for natural DNA sequences

1 reference

12 December 2020

A novel hierarchical clustering algorithm for gene sequences

1 reference

12 December 2020

Optimal word sizes for dissimilarity measures and estimation of the degree of dissimilarity between DNA sequences

1 reference

12 December 2020

Over- and under-representation of short oligonucleotides in DNA sequences

1 reference

12 December 2020

A reexamination of information theory-based methods for DNA-binding site identification

1 reference

12 December 2020

An information-based sequence distance and its application to whole mitochondrial genome phylogeny.

1 reference

12 December 2020

SiTaR: a novel tool for transcription factor binding site prediction

1 reference

12 December 2020

Estimating the entropy of DNA sequences

1 reference

12 December 2020

Informational parameters and randomness of mitochondrial DNA

1 reference

12 December 2020

Comparative analysis of long DNA sequences by per element information content using different contexts

1 reference

12 December 2020

The information content of DNA. II.

1 reference

12 December 2020

Sequence logos: a new way to display consensus sequences

1 reference

12 December 2020

1 reference

12 December 2020

Universal sequence map (USM) of arbitrary discrete sequences

1 reference

12 December 2020

SHED: Shannon Entropy Descriptors from Topological Feature Distributions

1 reference

12 December 2020

The average mutual information profile as a genomic signature

1 reference

12 December 2020

Data Compression Concepts and Algorithms and their Applications to Bioinformatics

1 reference

12 December 2020

Alternate measure of information useful for DNA sequences

1 reference

12 December 2020

Mutual information identifies sequence positions conserved within the nuclear receptor superfamily: approach reveals functionally important regions for DNA binding specificity

1 reference

12 December 2020

"Word" preference in the genomic text and genome evolution: different modes of n-tuplet usage in coding and noncoding sequences.

1 reference

12 December 2020

Entropy decrease associated to solute compartmentalization in the cell.

1 reference

12 December 2020

A visual framework for sequence analysis using n-grams and spectral rearrangement

1 reference

12 December 2020

In silico comparison of bacterial strains using mutual information

1 reference

12 December 2020

Discovery of Fur binding site clusters in Escherichia coli by information theory models.

1 reference

12 December 2020

1 reference

12 December 2020

DNA binding site characterization by means of Rényi entropy measures on nucleotide transitions.

1 reference

12 December 2020

RED: a set of molecular descriptors based on Renyi entropy.

1 reference

12 December 2020

Genome analysis with inter-nucleotide distances.

1 reference

12 December 2020

Information theory reveals large-scale synchronisation of statistical correlations in eukaryote genomes.

1 reference

12 December 2020

Prediction of recognition sites for genomic replication of classical swine fever virus with information analysis

1 reference

12 December 2020

Genomic classification using an information-based similarity index: application to the SARS coronavirus

1 reference

12 December 2020

Zones of low entropy in genomic sequences

1 reference

12 December 2020

Biological Information as Set-Based Complexity

1 reference

12 December 2020

A model for the emergence of the genetic code as a transition in a noisy information channel

1 reference

12 December 2020

Entropy estimation of very short symbolic sequences

1 reference

12 December 2020

Graphical representation of proteins

1 reference

12 December 2020

Detection and characterization of horizontal transfers in prokaryotes using genomic signature

1 reference

12 December 2020

Genomic signature: characterization and classification of species assessed by chaos game representation of sequences

1 reference

12 December 2020

On the validity of Shannon-information calculations for molecular biological sequences

1 reference

12 December 2020

Biological sequences as pictures: a generic two dimensional solution for iterated maps

1 reference

12 December 2020

Identifiers

DOI

10.1093/BIB/BBT068

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24058049%20AND%20SRC:MED&resulttype=core&format=json

14 June 2020

DBLP publication ID

journals/bib/Vinga14a

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24058049%20AND%20SRC:MED&resulttype=core&format=json

14 June 2020

24058049

1 reference