(Q34401955)

1 August 2017

The impact of whole-genome sequencing on the reconstruction of human population history (English)

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1 August 2017

whole genome sequencing

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Krishna R Veeramah

1

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1 August 2017

Michael F Hammer

series ordinal

2

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1 August 2017

language of work or name

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4 February 2014

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1 August 2017

Nature Reviews Genetics

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1 August 2017

15

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1 August 2017

3

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1 August 2017

149-162

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https://scigraph.springernature.com/pub.10.1038/nrg3625

1 August 2017

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cites work

Mitochondrial DNA and human evolution

1 reference

Genealogical trees, coalescent theory and the analysis of genetic polymorphisms

21 January 2018

1 reference

Genetic structure of human populations

21 January 2018

1 reference

The genetic structure and history of Africans and African Americans

21 January 2018

1 reference

Perspectives on human population structure at the cusp of the sequencing era.

21 January 2018

1 reference

SNP ascertainment bias in population genetic analyses: why it is important, and how to correct it.

21 January 2018

1 reference

Understanding the origin of species with genome-scale data: modelling gene flow

21 January 2018

1 reference

Use of y chromosome and mitochondrial DNA population structure in tracing human migrations

21 January 2018

1 reference

Statistical inferences in phylogeography

21 January 2018

1 reference

Coalescent-based, maximum likelihood inference in phylogeography

21 January 2018

1 reference

In defence of model-based inference in phylogeography.

21 January 2018

1 reference

Genetic and fossil evidence for the origin of modern humans

21 January 2018

1 reference

Mitochondrial genome variation and the origin of modern humans

21 January 2018

1 reference

African Populations and the Evolution of Human Mitochondrial DNA

21 January 2018

1 reference

Recent common ancestry of human Y chromosomes: evidence from DNA sequence data

21 January 2018

1 reference

Y chromosome sequence variation and the history of human populations

21 January 2018

1 reference

Neanderthals in central Asia and Siberia

21 January 2018

1 reference

Neandertal DNA sequences and the origin of modern humans

21 January 2018

1 reference

No evidence of Neandertal mtDNA contribution to early modern humans

21 January 2018

1 reference

On the probability of Neanderthal ancestry

21 January 2018

1 reference

Modern humans did not admix with Neanderthals during their range expansion into Europe

21 January 2018

1 reference

Deep haplotype divergence and long-range linkage disequilibrium at xp21.1 provide evidence that humans descend from a structured ancestral population.

21 January 2018

1 reference

Geography predicts neutral genetic diversity of human populations

21 January 2018

1 reference

Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa

21 January 2018

1 reference

Genotype, haplotype and copy-number variation in worldwide human populations

21 January 2018

1 reference

Genetics and recent human evolution.

21 January 2018

1 reference

Out of Africa: modern human origins special feature: explaining worldwide patterns of human genetic variation using a coalescent-based serial founder model of migration outward from Africa

21 January 2018

1 reference

Genetic evidence for archaic admixture in Africa

21 January 2018

1 reference

Detecting ancient admixture and estimating demographic parameters in multiple human populations

21 January 2018

1 reference

A Draft Sequence of the Neandertal Genome

21 January 2018

1 reference

Genetic history of an archaic hominin group from Denisova Cave in Siberia

21 January 2018

1 reference

Testing for ancient admixture between closely related populations

21 January 2018

1 reference

Effect of ancient population structure on the degree of polymorphism shared between modern human populations and ancient hominins

21 January 2018

1 reference

The date of interbreeding between Neandertals and modern humans

21 January 2018

1 reference

Ancient structure in Africa unlikely to explain Neanderthal and non-African genetic similarity

21 January 2018

1 reference

Higher levels of neanderthal ancestry in East Asians than in Europeans

21 January 2018

1 reference

The complete mitochondrial DNA genome of an unknown hominin from southern Siberia

21 January 2018

1 reference

Global genetic variation at OAS1 provides evidence of archaic admixture in Melanesian populations.

21 January 2018

1 reference

The complete genome sequence of a Neanderthal from the Altai Mountains

21 January 2018

1 reference

Genomic data reveal a complex making of humans

21 January 2018

1 reference

Multiple dispersals and modern human origins

21 January 2018

1 reference

Single, Rapid Coastal Settlement of Asia Revealed by Analysis of Complete Mitochondrial Genomes

21 January 2018

1 reference

An Aboriginal Australian genome reveals separate human dispersals into Asia

21 January 2018

1 reference

Demographic history of Oceania inferred from genome-wide data

21 January 2018

1 reference

A worldwide survey of human male demographic history based on Y-SNP and Y-STR data from the HGDP-CEPH populations

21 January 2018

1 reference

A geographically explicit genetic model of worldwide human-settlement history

21 January 2018

1 reference

Demographic history and rare allele sharing among human populations

21 January 2018

1 reference

Inferring demographic history from a spectrum of shared haplotype lengths

21 January 2018

1 reference

Bayesian inference of ancient human demography from individual genome sequences

21 January 2018

1 reference

Inference of human population history from individual whole-genome sequences

21 January 2018

1 reference

Variation in genome-wide mutation rates within and between human families

21 January 2018

1 reference

Rate of de novo mutations and the importance of father's age to disease risk

21 January 2018

1 reference

Analysis of genetic inheritance in a family quartet by whole-genome sequencing

21 January 2018

1 reference

Properties and rates of germline mutations in humans

21 January 2018

1 reference

Revising the human mutation rate: implications for understanding human evolution

21 January 2018

1 reference

Middle Paleolithic assemblages from the Indian subcontinent before and after the Toba super-eruption

21 January 2018

1 reference

Ethiopian genetic diversity reveals linguistic stratification and complex influences on the Ethiopian gene pool

21 January 2018

1 reference

Contrasting patterns of Y chromosome and mtDNA variation in Africa: evidence for sex-biased demographic processes

21 January 2018

1 reference

Hunter-gatherer genomic diversity suggests a southern African origin for modern humans

21 January 2018

1 reference

Genomic variation in seven Khoe-San groups reveals adaptation and complex African history

21 January 2018

1 reference

History of click-speaking populations of Africa inferred from mtDNA and Y chromosome genetic variation

21 January 2018

1 reference

An early divergence of KhoeSan ancestors from those of other modern humans is supported by an ABC-based analysis of autosomal resequencing data

21 January 2018

1 reference

Complete Khoisan and Bantu genomes from southern Africa

21 January 2018

1 reference

Evolutionary history and adaptation from high-coverage whole-genome sequences of diverse African hunter-gatherers

21 January 2018

1 reference

The genetic prehistory of southern Africa

21 January 2018

1 reference

Ancient admixture in human history

21 January 2018

1 reference

Inference of population splits and mixtures from genome-wide allele frequency data

21 January 2018

1 reference

The Later Stone Age calvaria from Iwo Eleru, Nigeria: morphology and chronology

21 January 2018

1 reference

Out of Africa: modern human origins special feature: middle and later Pleistocene hominins in Africa and Southwest Asia

21 January 2018

1 reference

Early dispersal of modern humans in Europe and implications for Neanderthal behaviour

21 January 2018

1 reference

The earliest evidence for anatomically modern humans in northwestern Europe

21 January 2018

1 reference

Human evolution out of Africa: the role of refugia and climate change

21 January 2018

1 reference

The genetic history of Europeans

21 January 2018

1 reference

Synthetic Maps of Human Gene Frequencies in Europeans

21 January 2018

1 reference

Interpreting principal component analyses of spatial population genetic variation

21 January 2018

1 reference

Evidence for Paleolithic and Neolithic gene flow in Europe

21 January 2018

1 reference

Tracing European founder lineages in the Near Eastern mtDNA pool

21 January 2018

1 reference

Geographic patterns of mtDNA diversity in Europe

21 January 2018

1 reference

A predominantly neolithic origin for European paternal lineages

21 January 2018

1 reference

Y genetic data support the Neolithic demic diffusion model

21 January 2018

1 reference

The genetic legacy of Paleolithic Homo sapiens sapiens in extant Europeans: a Y chromosome perspective

21 January 2018

1 reference

Origins and evolution of the Europeans' genome: evidence from multiple microsatellite loci

21 January 2018

1 reference

Genes mirror geography within Europe

21 January 2018

1 reference

Global distribution of genomic diversity underscores rich complex history of continental human populations

21 January 2018

1 reference

Gene flow from North Africa contributes to differential human genetic diversity in southern Europe

21 January 2018

1 reference

The geography of recent genetic ancestry across Europe

21 January 2018

1 reference

Ancestry of modern Europeans: contributions of ancient DNA.

21 January 2018

1 reference

Genetic discontinuity between local hunter-gatherers and central Europe's first farmers

21 January 2018

1 reference

Ancient DNA reveals lack of continuity between neolithic hunter-gatherers and contemporary Scandinavians

21 January 2018

1 reference

Ancient DNA reveals key stages in the formation of central European mitochondrial genetic diversity

21 January 2018

1 reference

Neolithic mitochondrial haplogroup H genomes and the genetic origins of Europeans

21 January 2018

1 reference

Ancient DNA from European early Neolithic farmers reveals their near eastern affinities

21 January 2018

1 reference

Ancient DNA from the first European farmers in 7500-year-old Neolithic sites

21 January 2018

1 reference

Ancient DNA from hunter-gatherer and farmer groups from Northern Spain supports a random dispersion model for the Neolithic expansion into Europe

21 January 2018

1 reference

Palaeogenetic evidence supports a dual model of Neolithic spreading into Europe

21 January 2018

1 reference

Ancient DNA reveals male diffusion through the Neolithic Mediterranean route

21 January 2018

1 reference

New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing

21 January 2018

1 reference

Genetic variation in the Sorbs of eastern Germany in the context of broader European genetic diversity

21 January 2018

1 reference

Genomic affinities of two 7,000-year-old Iberian hunter-gatherers

21 January 2018

1 reference

Origins and genetic legacy of Neolithic farmers and hunter-gatherers in Europe

21 January 2018

1 reference

Genetic evidence for different male and female roles during cultural transitions in the British Isles

21 January 2018

1 reference

The human genetic history of the Americas: the final frontier

21 January 2018

1 reference

The Settlement of the Americas: A Comparison of the Linguistic, Dental, and Genetic Evidence [and Comments and Reply]

21 January 2018

1 reference

Mitochondrial population genomics supports a single pre-Clovis origin with a coastal route for the peopling of the Americas

21 January 2018

1 reference

Updated three-stage model for the peopling of the Americas

21 January 2018

1 reference

Genetic variation and population structure in native Americans

21 January 2018

1 reference

High-Resolution SNPs and Microsatellite Haplotypes Point to a Single, Recent Entry of Native American Y Chromosomes into the Americas

21 January 2018

1 reference

A statistical evaluation of models for the initial settlement of the american continent emphasizes the importance of gene flow with Asia

21 January 2018

1 reference

Ancient human genome sequence of an extinct Palaeo-Eskimo

21 January 2018

1 reference

Reconstructing Native American population history

21 January 2018

1 reference

Ancient DNA perspectives on American colonization and population history

21 January 2018

1 reference

DNA from pre-Clovis human coprolites in Oregon, North America

21 January 2018

1 reference

21 January 2018

1 reference

Learning about human population history from ancient and modern genomes.

21 January 2018

1 reference

Population genetic inference from genomic sequence variation

21 January 2018

1 reference

SNP calling, genotype calling, and sample allele frequency estimation from New-Generation Sequencing data

21 January 2018

1 reference

Inference of site frequency spectra from high-throughput sequence data: quantification of selection on nonsynonymous and synonymous sites in humans

21 January 2018

1 reference

A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data

21 January 2018

1 reference

Estimation of allele frequencies from high-coverage genome-sequencing projects

21 January 2018

1 reference

Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals

21 January 2018

1 reference

Population genetic inference from resequencing data

21 January 2018

1 reference

Accounting for bias from sequencing error in population genetic estimates

21 January 2018

1 reference

Estimation of nucleotide diversity, disequilibrium coefficients, and mutation rates from high-coverage genome-sequencing projects

21 January 2018

1 reference

A reduced representation approach to population genetic analyses and applications to human evolution

21 January 2018

1 reference

The next generation of molecular markers from massively parallel sequencing of pooled DNA samples

21 January 2018

1 reference

Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping.

21 January 2018

1 reference

A new isolation with migration model along complete genomes infers very different divergence processes among closely related great ape species

21 January 2018

1 reference

Estimating variable effective population sizes from multiple genomes: a sequentially markov conditional sampling distribution approach

21 January 2018

1 reference

Approximating the coalescent with recombination

21 January 2018

1 reference

Length distributions of identity by descent reveal fine-scale demographic history

21 January 2018

1 reference

Population genetics models of local ancestry

21 January 2018

1 reference

Haplotype phasing: existing methods and new developments

21 January 2018

1 reference

Haplotype-resolved genome sequencing of a Gujarati Indian individual.

21 January 2018

1 reference

Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology

21 January 2018

1 reference

Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse

21 January 2018

1 reference

Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans

21 January 2018

1 reference

Host-interactive genes in Amerindian Helicobacter pylori diverge from their Old World homologs and mediate inflammatory responses

21 January 2018

1 reference

Analyses of pig genomes provide insight into porcine demography and evolution

21 January 2018

1 reference

A map of rice genome variation reveals the origin of cultivated rice

21 January 2018

1 reference

Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania

21 January 2018

1 reference

Archaic human ancestry in East Asia

21 January 2018

1 reference

Autosomal and X-linked single nucleotide polymorphisms reveal a steep Asian-Melanesian ancestry cline in eastern Indonesia and a sex bias in admixture rates.

21 January 2018

1 reference

Genetic dating indicates that the Asian-Papuan admixture through Eastern Indonesia corresponds to the Austronesian expansion

21 January 2018

1 reference

DNA analysis of an early modern human from Tianyuan Cave, China

21 January 2018

1 reference

Direct measure of the de novo mutation rate in autism and schizophrenia cohorts

21 January 2018

1 reference

Rates and fitness consequences of new mutations in humans

21 January 2018

1 reference

Rate, molecular spectrum, and consequences of human mutation

21 January 2018

1 reference

An abundance of rare functional variants in 202 drug target genes sequenced in 14,002 people

21 January 2018

1 reference

Next Generation Sequencing of Ancient DNA: Requirements, Strategies and Perspectives

21 January 2018

1 reference

Multiplexed DNA sequence capture of mitochondrial genomes using PCR products

21 January 2018

1 reference

A novel DNA sequence database for analyzing human demographic history

21 January 2018

1 reference

Patterns of damage in genomic DNA sequences from a Neandertal

21 January 2018

1 reference

The effect of ancient DNA damage on inferences of demographic histories

21 January 2018

1 reference

Accommodating the effect of ancient DNA damage on inferences of demographic histories

21 January 2018

1 reference

Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA.

21 January 2018

1 reference

mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters

21 January 2018

1 reference

Africans and Asians abroad: genetic diversity in Europe

21 January 2018

1 reference

Archaeogenetics--towards a 'new synthesis'?

21 January 2018

1 reference

An integrated map of genetic variation from 1,092 human genomes

21 January 2018

1 reference

The four faces of Eve: hypothesis compatibility and human origins

21 January 2018

1 reference

DNA sequencing with nanopores

21 January 2018

1 reference

Ancient DNA for the Archaeologist: The Future of African Research

21 January 2018

1 reference

Phylogeography of mitochondrial DNA in western Europe.

21 January 2018

1 reference

Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans

31 March 2020

1 reference

A mitochondrial genome sequence of a hominin from Sima de los Huesos

31 March 2020

1 reference

Estimate of the mutation rate per nucleotide in humans

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24492235

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Monte Verde. A Late Pleistocene Settlement in Chile. Vol. 1, Palaeoenvironment and Site Context. Tom D. Dillehay. Smithsonian Institution Press, Washington, DC, 1989. xxiv, 306 pp., illus. $49.95. Smithsonian Series in Archaeological Inquiry

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24492235

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Detecting ancient admixture in humans using sequence polymorphism data

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24492235

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NRG3625

1 reference

Dimensions Publication ID

1 August 2017

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