(Q34410038)

25311640

2 August 2017

title

Linkage disequilibrium and genome-wide association analysis for anthocyanin pigmentation and fruit color in eggplant (English)

1 reference

25311640

genome-wide association study

2 August 2017

main subject

0 references

1 reference

1 reference

linkage disequilibrium

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Sergio Lanteri

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Lorenzo Barchi

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

author name string

Fabio Cericola

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Laura Toppino

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Nazzareno Acciarri

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Laura Pulcini

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Tea Sala

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Giuseppe Leonardo Rotino

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

language of work or name

English

0 references

publication date

14 October 2014

1 reference

2 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

volume

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

page(s)

896

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

Metabolic engineering of flavonoids in tomato (Solanum lycopersicum): the potential for metabolomics

5 June 2020

cites work

1 reference

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6 July 2018

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QTL mapping in eggplant reveals clusters of yield-related loci and orthology with the tomato genome

6 July 2018

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Advantages and pitfalls in the application of mixed-model association methods

6 July 2018

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The population structure and diversity of eggplant from Asia and the Mediterranean Basin

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Wild relatives of the eggplant (Solanum melongena L.: Solanaceae): new understanding of species names in a complex group

6 July 2018

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A RAD tag derived marker based eggplant linkage map and the location of QTLs determining anthocyanin pigmentation.

6 July 2018

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Genome-wide association mapping in tomato (Solanum lycopersicum) is possible using genome admixture of Solanum lycopersicum var. cerasiforme

6 July 2018

1 reference

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Phylogeographic relationships among Asian eggplants and new perspectives on eggplant domestication

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Novel measures of linkage disequilibrium that correct the bias due to population structure and relatedness.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Identification of SNP and SSR markers in eggplant using RAD tag sequencing.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Mapping and linkage disequilibrium analysis with a genome-wide collection of SNPs that detect polymorphism in cultivated tomato

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Chromosomal evolution in the plant family Solanaceae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Genomic selection in plant breeding: from theory to practice

6 July 2018

1 reference

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Association mapping: critical considerations shift from genotyping to experimental design

6 July 2018

1 reference

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Fast and accurate short read alignment with Burrows-Wheeler transform

6 July 2018

1 reference

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Rapid SNP discovery and genetic mapping using sequenced RAD markers

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Recombination and linkage disequilibrium in Arabidopsis thaliana.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

TASSEL: software for association mapping of complex traits in diverse samples

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

The Genetics of Anthocyanin Coloration in Eggplant (SOLANUM MELONGENA L.).

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

A mixed-model approach to association mapping using pedigree information with an illustration of resistance to Phytophthora infestans in potato

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

A unified mixed-model method for association mapping that accounts for multiple levels of relatedness

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

The genetic, developmental, and molecular bases of fruit size and shape variation in tomato

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Corn and humans: recombination and linkage disequilibrium in two genomes of similar size

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Structure of linkage disequilibrium in plants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Statistical significance for genomewide studies

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Genetic diversity and selection in the maize starch pathway

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

A comparative genetic linkage map of eggplant (Solanum melongena) and its implications for genome evolution in the solanaceae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

MapChart: software for the graphical presentation of linkage maps and QTLs

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Inference of population structure using multilocus genotype data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Cloning and expression of a cDNA encoding betanidin 5-O-glucosyltransferase, a betanidin- and flavonoid-specific enzyme with high homology to inducible glucosyltransferases from the Solanaceae

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Characterization of the gene encoding dihydroflavonol 4-reductase in tomato

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

High density molecular linkage maps of the tomato and potato genomes

6 July 2018

1 reference

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Simple sequence repeat-based association analysis of fruit traits in eggplant (Solanum melongena).

6 July 2018

1 reference

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RFLP maps of potato and their alignment with the homoeologous tomato genome.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Identification and mapping of three flower colour loci of potato (S. tuberosum L.) by RFLP analysis.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

The potato R locus codes for dihydroflavonol 4-reductase.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Natural DNA variation at candidate loci is associated with potato chip color, tuber starch content, yield and starch yield

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Candidate gene analysis of anthocyanin pigmentation loci in the Solanaceae

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Bacterial Wilt Resistance in Tomato, Pepper, and Eggplant: Genetic Resources Respond to Diverse Strains in theRalstonia solanacearumSpecies Complex

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4210512

Purple as a tomato: towards high anthocyanin tomatoes

9 December 2018

1 reference

12 December 2020

QTL analysis of morphological traits in eggplant and implications for conservation of gene function during evolution of solanaceous species

1 reference

12 December 2020

The A locus that controls anthocyanin accumulation in pepper encodes a MYB transcription factor homologous to Anthocyanin2 of Petunia

1 reference

12 December 2020

Association genetics in crop improvement

1 reference

12 December 2020

A detailed synteny map of the eggplant genome based on conserved ortholog set II (COSII) markers

1 reference

12 December 2020

Linkage of the A locus for the presence of anthocyanin and fs10.1, a major fruit-shape QTL in pepper

1 reference

12 December 2020

Molecular diversity analysis of eggplant (Solanum melongena) genetic resources

1 reference

12 December 2020

QTL mapping of yield, agronomic and quality traits in tetraploid potato (Solanum tuberosum subsp. tuberosum)

1 reference

12 December 2020

Segregation distortion and linkage analysis in eggplant (Solanum melongena L.).

1 reference

12 December 2020

Mapping of yield-related QTLs in pepper in an interspecific cross of Capsicum annuum and C. frutescens

1 reference

12 December 2020

Patterns of genetic diversity and linkage disequilibrium in a highly structured Hordeum vulgare association-mapping population for the Mediterranean basin

1 reference

12 December 2020

Activation tagging in tomato identifies a transcriptional regulator of anthocyanin biosynthesis, modification, and transport

1 reference

12 December 2020

Development of selective markers linked to a major QTL for parthenocarpy in eggplant (Solanum melongena L.).

1 reference

12 December 2020

Optimizing parental selection for genetic linkage maps

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-15-896

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

25311640

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25311640%20AND%20SRC:MED&resulttype=core&format=json