(Q34425544)

2 August 2017

title

Contrasted patterns of selective pressure in three recent paralogous gene pairs in the Medicago genus (L.). (English)

1 reference

2 August 2017

Joan Ho-Huu

1

1 reference

2 August 2017

Joëlle Ronfort

2

1 reference

2 August 2017

Stéphane De Mita

3

1 reference

2 August 2017

Thomas Bataillon

4

1 reference

2 August 2017

Isabelle Hochu

5

1 reference

2 August 2017

Audrey Weber

6

1 reference

2 August 2017

Nathalie Chantret

7

1 reference

2 August 2017

publication date

1 October 2012

1 reference

2 August 2017

published in

BMC Evolutionary Biology

1 reference

2 August 2017

volume

12

1 reference

2 August 2017

page(s)

195

1 reference

The Medicago genome provides insight into the evolution of rhizobial symbioses

2 August 2017

cites work

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Phylogeny and character evolution in Medicago (Leguminosae): Evidence from analyses of plastid trnK/matK and nuclear GA3ox1 sequences

6 July 2018

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Reciprocal silencing, transcriptional bias and functional divergence of homeologs in polyploid cotton (gossypium)

6 July 2018

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6 July 2018

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Escape from adaptive conflict after duplication in an anthocyanin pathway gene

6 July 2018

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6 July 2018

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Duplicate gene evolution and expression in the wake of vertebrate allopolyploidization

6 July 2018

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6 July 2018

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The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla

6 July 2018

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Evolving ideas of legume evolution and diversity: a taxonomic perspective on the occurrence of nodulation

6 July 2018

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Evolution of duplicate gene expression in polyploid and hybrid plants

6 July 2018

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Patterns of expansion and expression divergence in the plant polygalacturonase gene family

6 July 2018

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The Genome of Black Cottonwood, Populus trichocarpa (Torr. & Gray)

6 July 2018

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Widespread genome duplications throughout the history of flowering plants

6 July 2018

1 reference

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Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Expression divergence between duplicate genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the tertiary

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

The evolutionary dynamics of plant duplicate genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Rapid subfunctionalization accompanied by prolonged and substantial neofunctionalization in duplicate gene evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

The PIN and LAX families of auxin transport genes in Medicago truncatula.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

From pollen tubes to infection threads: recruitment of Medicago floral pectic genes for symbiosis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Functional divergence of duplicated genes formed by polyploidy during Arabidopsis evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

The effect of gene conversion on the divergence between duplicated genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

A Simple, Fast, and Accurate Algorithm to Estimate Large Phylogenies by Maximum Likelihood

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Excess non-synonymous substitutions suggest that positive selection episodes occurred during the evolution of DNA-binding domains in the Arabidopsis R2R3-MYB gene family.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Role of duplicate genes in genetic robustness against null mutations

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Artemis: sequence visualization and annotation

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

The evolutionary fate and consequences of duplicate genes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Codon-substitution models for heterogeneous selection pressure at amino acid sites

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Genome evolution in polyploids

6 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

6 July 2018

https://pubmed.ncbi.nlm.nih.gov/23025552

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Preservation of duplicate genes by complementary, degenerative mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Comparable rates of gene loss and functional divergence after genome duplications early in vertebrate evolution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

PAML: a program package for phylogenetic analysis by maximum likelihood

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

The Staden sequence analysis package

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

A codon-based model of nucleotide substitution for protein-coding DNA sequences

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Molecular evolution and positive selection of the symbiotic gene NORK in Medicago truncatula

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Point mutations with positive selection were a major force during the evolution of a receptor-kinase resistance gene family of rice

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

A maximum likelihood method for detecting functional divergence at individual codon sites, with application to gene family evolution

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Extensive duplication and reshuffling in the Arabidopsis genome

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

Ribosomal External and Internal Transcribed Spacers: Combined Use in the Phylogenetic Analysis of Medicago (Leguminosae)

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3517903

The evolutionary fate of recently duplicated retrogenes in mice

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23025552

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23025552

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2148-12-195

1 reference

Dimensions Publication ID

2 August 2017

0 references

1 reference

2 August 2017

1 reference