(Q34529615)

2 August 2017

title

C-mii: a tool for plant miRNA and target identification (English)

1 reference

2 August 2017

Somrak Numnark

1

1 reference

2 August 2017

Wuttichai Mhuantong

series ordinal

2

1 reference

2 August 2017

Supawadee Ingsriswang

series ordinal

3

1 reference

2 August 2017

Duangdao Wichadakul

series ordinal

4

1 reference

2 August 2017

language of work or name

English

0 references

publication date

13 December 2012

1 reference

2 August 2017

1 reference

2 August 2017

volume

13 Suppl 7

1 reference

2 August 2017

page(s)

S16

1 reference

miRTour: Plant miRNA and target prediction tool

2 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

psRNATarget: a plant small RNA target analysis server

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Identification, characterization and expression analysis of MicroRNAs and their targets in the potato (Solanum tuberosum)

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Identification and characterization of microRNAs and their target genes in tobacco (Nicotiana tabacum)

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

MicroPC (microPC): A comprehensive resource for predicting and comparing plant microRNAs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Current tools for the identification of miRNA genes and their targets.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

MicroRNAs: target recognition and regulatory functions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Revisiting the principles of microRNA target recognition and mode of action

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

In silico identification of conserved microRNAs in large number of diverse plant species

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

The universal protein resource (UniProt)

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

miRBase: tools for microRNA genomics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Small RNAs as big players in plant abiotic stress responses and nutrient deprivation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Functions of microRNAs and related small RNAs in plants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

miRBase: microRNA sequences, targets and gene nomenclature

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Plant microRNA: a small regulatory molecule with big impact

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

miRU: an automated plant miRNA target prediction server

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Rfam: annotating non-coding RNAs in complete genomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Prediction and identification of Arabidopsis thaliana microRNAs and their mRNA targets

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Detection of 91 potential conserved plant microRNAs in Arabidopsis thaliana and Oryza sativa identifies important target genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Computational identification of plant microRNAs and their targets, including a stress-induced miRNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

MUSCLE: multiple sequence alignment with high accuracy and high throughput

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

The Jalview Java alignment editor

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

MicroRNAs: genomics, biogenesis, mechanism, and function

7 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

7 July 2018

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

A uniform system for microRNA annotation

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Prediction of plant microRNA targets

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Basic local alignment search tool

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

Identification of plant microRNA homologs.

7 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

TAPIR, a web server for the prediction of plant microRNA targets, including target mimics

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

A toolkit for analysing large-scale plant small RNA datasets

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Identification and characterization of new plant microRNAs using EST analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Conservation and divergence of plant microRNA genes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Computational identification of novel microRNAs and targets in Brassica napus

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Identification of soybean microRNAs and their targets

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

In silico identification and characterization of microRNAs and their putative target genes in Solanaceae plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Criteria for annotation of plant MicroRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Specific Effects of MicroRNAs on the Plant Transcriptome

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Target-align: a tool for plant microRNA target identification

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3521235

miRNA Target Prediction in Plants

27 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-S7-S16

Identification of conserved microRNAs and their target genes in tomato (Lycopersicon esculentum)

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23281648

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identification of cotton microRNAs and their targets

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23281648

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evidence that miRNAs are different from other RNAs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23281648

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-13-S7-S16

1 reference

2 August 2017

1 reference

2 August 2017

1 reference