(Q34566074)

3 August 2017

title

Fast and accurate read mapping with approximate seeds and multiple backtracking (English)

1 reference

3 August 2017

Enrico Siragusa

1

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3 August 2017

David Weese

series ordinal

2

1 reference

3 August 2017

Knut Reinert

series ordinal

3

1 reference

3 August 2017

language of work or name

English

0 references

publication date

28 January 2013

1 reference

3 August 2017

published in

Nucleic Acids Research

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3 August 2017

volume

41

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3 August 2017

issue

7

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3 August 2017

page(s)

e78

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Creative Commons Attribution-NonCommercial 3.0 Unported

3 August 2017

copyright license

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

RazerS 3: faster, fully sensitive read mapping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

Fast gapped-read alignment with Bowtie 2

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

Hobbes: optimized gram-based methods for efficient read alignment

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

A novel and well-defined benchmarking method for second generation read mapping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

SHRiMP2: sensitive yet practical SHort Read Mapping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

Personalized copy number and segmental duplication maps using next-generation sequencing.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

SOAP2: an improved ultrafast tool for short read alignment

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

Fast and accurate short read alignment with Burrows-Wheeler transform

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

A general method applicable to the search for similarities in the amino acid sequence of two proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3627565

A guided tour to approximate string matching

7 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT005

Replacing suffix trees with enhanced suffix arrays

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT005

A fast bit-vector algorithm for approximate string matching based on dynamic programming

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT005

On-line construction of suffix trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT005

Better external memory suffix array construction

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FNAR%2FGKT005

21 January 2018

Identifiers

DOI

10.1093/NAR/GKT005

1 reference

3 August 2017

1 reference

3 August 2017

1 reference