(Q34566240)

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ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants

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scholarly article

1 reference

Europe PubMed Central

3 August 2017

ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants (English)

1 reference

Europe PubMed Central

3 August 2017

author name string

Takeshi Obayashi

1

1 reference

Europe PubMed Central

3 August 2017

Kozo Nishida

2

1 reference

Europe PubMed Central

3 August 2017

Kota Kasahara

3

1 reference

Europe PubMed Central

3 August 2017

Kengo Kinoshita

4

1 reference

Europe PubMed Central

3 August 2017

publication date

7 January 2011

1 reference

Europe PubMed Central

3 August 2017

number of pages

7

1 reference

based on heuristic

inferred from page(s)

Plant and Cell Physiology

1 reference

Europe PubMed Central

3 August 2017

52

1 reference

Europe PubMed Central

3 August 2017

213-219

1 reference

Europe PubMed Central

3 August 2017

2

1 reference

Europe PubMed Central

3 August 2017

COXPRESdb: a database to compare gene coexpression in seven model animals

1 reference

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Cytoscape Web: an interactive web-based network browser

1 reference

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7 July 2018

Coexpression landscape in ATTED-II: usage of gene list and gene network for various types of pathways

1 reference

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7 July 2018

Database resources of the National Center for Biotechnology Information

1 reference

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7 July 2018

Co-expression tools for plant biology: opportunities for hypothesis generation and caveats

1 reference

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7 July 2018

Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

7 July 2018

ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

7 July 2018

ATTED-II provides coexpressed gene networks for Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

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Conserved co-expression for candidate disease gene prioritization

1 reference

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The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access

2 references

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7 July 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

9 December 2018

The Arabidopsis Information Resource (TAIR): gene structure and function annotation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

7 July 2018

The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses.

1 reference

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Approaches for extracting practical information from gene co-expression networks in plant biology

1 reference

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7 July 2018

ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis

1 reference

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7 July 2018

NCBI GEO: mining tens of millions of expression profiles--database and tools update

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

7 July 2018

A gene expression map of Arabidopsis thaliana development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

7 July 2018

CSB.DB: a comprehensive systems-biology database

1 reference

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NASCArrays: a repository for microarray data generated by NASC's transcriptomics service

1 reference

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Cytoscape: a software environment for integrated models of biomolecular interaction networks

1 reference

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7 July 2018

A gene-coexpression network for global discovery of conserved genetic modules

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3037081

7 July 2018

Cluster analysis and display of genome-wide expression patterns

1 reference

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7 July 2018

Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression

1 reference

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21 January 2018

A chloroplastic UDP-glucose pyrophosphorylase from Arabidopsis is the committed enzyme for the first step of sulfolipid biosynthesis

1 reference

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1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/PCP/PCQ203

1 reference

Europe PubMed Central

3 August 2017

1 reference

Europe PubMed Central

3 August 2017

1 reference

Europe PubMed Central

3 August 2017

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