(Q34582331)

3 August 2017

Striped Smith-Waterman speeds database searches six times over other SIMD implementations (English)

1 reference

3 August 2017

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Michael Farrar

1

1 reference

PubMed ID

17110365

3 August 2017

language of work or name

English

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publication date

16 November 2006

1 reference

3 August 2017

6

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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3 August 2017

23

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3 August 2017

156-161

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3 August 2017

2

1 reference

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

3 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

Prediction of the exon-intron structure by a dynamic programming approach.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

An improved algorithm for matching biological sequences.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

Profile analysis: detection of distantly related proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

Amino acid substitution matrices from protein blocks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

A general method applicable to the search for similarities in the amino acid sequence of two proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

Improved tools for biological sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

Six-fold speed-up of Smith-Waterman sequence database searches using parallel processing on common microprocessors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

Identification of common molecular subsequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

Using video-oriented instructions to speed up sequence comparison

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

On finding all suboptimal foldings of an RNA molecule

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTL582

10.1093/BIOINFORMATICS/BTL582

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/Farrar07

3 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

17110365