(Q34619359)

3 August 2017

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title

DNA replication initiation: mechanisms and regulation in bacteria (English)

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3 August 2017

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Melissa L Mott

1

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3 August 2017

James M Berger

series ordinal

2

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3 August 2017

language of work or name

English

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publication date

1 May 2007

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Nature Reviews Microbiology

3 August 2017

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3 August 2017

5

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3 August 2017

343-354

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3 August 2017

5

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https://scigraph.springernature.com/pub.10.1038/nrmicro1640

3 August 2017

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cites work

The dnaA protein complex with the E. coli chromosomal replication origin (oriC) and other DNA sites.

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Sites of dnaA protein-binding in the replication origin of the Escherichia coli K-12 chromosome.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Interaction of the initiator protein DnaA of Escherichia coli with its DNA target

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

IHF redistributes bound initiator protein, DnaA, on supercoiled oriC of Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

IHF and HU stimulate assembly of pre-replication complexes at Escherichia coli oriC by two different mechanisms.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Two discriminatory binding sites in the Escherichia coli replication origin are required for DNA strand opening by initiator DnaA-ATP.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Mechanism of origin unwinding: sequential binding of DnaA to double- and single-stranded DNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

ATP- and ADP-dnaA protein, a molecular switch in gene regulation.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Cell cycle-specific changes in nucleoprotein complexes at a chromosomal replication origin.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Building a bacterial orisome: emergence of new regulatory features for replication origin unwinding

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Duplex opening by dnaA protein at novel sequences in initiation of replication at the origin of the E. coli chromosome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The initiator function of DnaA protein is negatively regulated by the sliding clamp of the E. coli chromosomal replicase.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

In vivo evidence for the involvement of anionic phospholipids in initiation of DNA replication in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Architecture of bacterial replication initiation complexes: orisomes from four unrelated bacteria

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Control of chromosome replication in caulobacter crescentus

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Cell cycle control by an essential bacterial two-component signal transduction protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Negative control of bacterial DNA replication by a cell cycle regulatory protein that binds at the chromosome origin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Cell cycle regulator phosphorylation stimulates two distinct modes of binding at a chromosome replication origin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

DnaA Protein of Escherichia coli: oligomerization at the E. coli chromosomal origin is required for initiation and involves specific N-terminal amino acids

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The interaction domains of the DnaA and DnaB replication proteins of Escherichia coli.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Escherichia coli DnaA protein. The N-terminal domain and loading of DnaB helicase at the E. coli chromosomal origin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The N-terminus promotes oligomerization of the Escherichia coli initiator protein DnaA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Functional domains of DnaA proteins.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Threonine 435 of Escherichia coli DnaA protein confers sequence-specific DNA binding activity.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Structural basis of replication origin recognition by the DnaA protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The structure of bacterial DnaA: implications for general mechanisms underlying DNA replication initiation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Structural basis for ATP-dependent DnaA assembly and replication-origin remodeling

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Membrane-mediated release of nucleotide from an initiator of chromosomal replication, Escherichia coli DnaA, occurs with insertion of a distinct region of the protein into the lipid bilayer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Site-directed mutational analysis for the membrane binding of DnaA protein. Identification of amino acids involved in the functional interaction between DnaA protein and acidic phospholipids

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Molecular mechanism for functional interaction between DnaA protein and acidic phospholipids: identification of important amino acids

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Identification of amino acids involved in the functional interaction between DnaA protein and acidic phospholipids

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Mutations in DnaA protein suppress the growth arrest of acidic phospholipid-deficient Escherichia coli cells

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

DnaC protein contains a modified ATP-binding motif and belongs to a novel family of ATPases including also DnaA.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Evolutionary history and higher order classification of AAA+ ATPases

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The box VII motif of Escherichia coli DnaA protein is required for DnaA oligomerization at the E. coli replication origin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Structure and function of Cdc6/Cdc18: implications for origin recognition and checkpoint control

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Three-dimensional structure of the beta subunit of E. coli DNA polymerase III holoenzyme: a sliding DNA clamp

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Crystal structure of the eukaryotic DNA polymerase processivity factor PCNA

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Relationship between Cell Size and Time of Initiation of DNA Replication

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The bacterial origin of replication, oriC.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

E. coli SeqA protein binds oriC in two different methyl-modulated reactions appropriate to its roles in DNA replication initiation and origin sequestration

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

SeqA blocking of DnaA-oriC interactions ensures staged assembly of the E. coli pre-RC.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

A case for sliding SeqA tracts at anchored replication forks during Escherichia coli chromosome replication and segregation

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

SeqA: a negative modulator of replication initiation in E. coli.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

SeqA limits DnaA activity in replication from oriC in Escherichia coli.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Coordinating DNA replication initiation with cell growth: differential roles for DnaA and SeqA proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Binding of SeqA protein to DNA requires interaction between two or more complexes bound to separate hemimethylated GATC sequences

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The Escherichia coli SeqA protein binds specifically and co-operatively to two sites in hemimethylated and fully methylated oriC

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Crystal structure of a SeqA-N filament: implications for DNA replication and chromosome organization

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Specific N-terminal interactions of the Escherichia coli SeqA protein are required to form multimers that restrain negative supercoils and form foci

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

High-affinity binding sites for the initiator protein DnaA on the chromosome of Escherichia coli.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

A novel DnaA protein-binding site at 94.7 min on the Escherichia coli chromosome

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Negative control of replication initiation by a novel chromosomal locus exhibiting exceptional affinity for Escherichia coli DnaA protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

DnaA initiator--also a transcription factor

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Autoregulation of the dnaA gene of Escherichia coli K12.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Autoregulation of the DNA replication gene dnaA in E. coli K-12.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Hda, a novel DnaA-related protein, regulates the replication cycle in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Controlled initiation of chromosomal replication in Escherichia coli requires functional Hda protein

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Protein associations in DnaA-ATP hydrolysis mediated by the Hda-replicase clamp complex

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Bacillus subtilis YabA is involved in determining the timing and synchrony of replication initiation.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

An expanded view of bacterial DNA replication.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Functional dissection of YabA, a negative regulator of DNA replication initiation in Bacillus subtilis

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Flexibility and governance in eukaryotic DNA replication.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The activities of eukaryotic replication origins in chromatin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

DNA topology, not DNA sequence, is a critical determinant for Drosophila ORC-DNA binding

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The Fis protein: it's not just for DNA inversion anymore

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Integration host factor: a protein for all reasons.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

More than just "histone-like" proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The Bacillus subtilis DnaD and DnaB proteins exhibit different DNA remodelling activities.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The regulation of transcription initiation by integration host factor.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Hin-mediated site-specific recombination requires two 26 bp recombination sites and a 60 bp recombinational enhancer.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Global structure similarities of intact and nicked DNA complexed with IHF measured in solution by fluorescence resonance energy transfer

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Structure of the Escherichia coli Fis-DNA complex probed by protein conjugated with 1,10-phenanthroline copper(I) complex

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The Escherichia coli Fis protein prevents initiation of DNA replication from oriC in vitro

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Escherichia coli prereplication complex assembly is regulated by dynamic interplay among Fis, IHF and DnaA.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

The FIS protein fails to block the binding of DnaA protein to oriC, the Escherichia coli chromosomal origin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

FIS modulates growth phase-dependent topological transitions of DNA in Escherichia coli

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

IHF-dependent activation of P1 plasmid origin by dnaA.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

A dual binding site for integration host factor and the response regulator CtrA inside the Caulobacter crescentus replication origin

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Where does bacterial replication start? Rules for predicting the oriC region

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Evolutionary relationships and structural mechanisms of AAA+ proteins

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

Conserved arginine residues implicated in ATP hydrolysis, nucleotide-sensing, and inter-subunit interactions in AAA and AAA+ ATPases.

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

AAA+ proteins: have engine, will work

31 March 2020

1 reference

https://api.crossref.org/works/10.1038%2FNRMICRO1640

31 March 2020

Identifiers

DOI

10.1038/NRMICRO1640

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Dimensions Publication ID

3 August 2017

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