(Q34619759)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16628221%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

title

pH-dependent conformational switch activates the inhibitor of transcription elongation (English)

1 reference

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19 January 2020

7

1 reference

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19 January 2020

author name string

Oleg Laptenko

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16628221%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Seung-Sup Kim

2

1 reference

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19 January 2020

Jookyung Lee

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16628221%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

Marina Starodubtseva

4

1 reference

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19 January 2020

Fellipe Cava

5

1 reference

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19 January 2020

Jose Berenguer

6

1 reference

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19 January 2020

Sergei Borukhov

8

1 reference

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19 January 2020

language of work or name

English

0 references

publication date

20 April 2006

1 reference

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19 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16628221%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

volume

25

1 reference

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19 January 2020

issue

10

1 reference

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19 January 2020

page(s)

2131-2141

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16628221%20AND%20SRC:MED&resulttype=core&format=json

Regulation through the RNA polymerase secondary channel. Structural and functional variability of the coiled-coil transcription factors

19 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Bacterial transcription elongation factors: new insights into molecular mechanism of action

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Thinking quantitatively about transcriptional regulation.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Diffusion of nucleoside triphosphates and role of the entry site to the RNA polymerase II active center

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Regulation of RNA polymerase through the secondary channel.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Antibacterial peptide microcin J25 inhibits transcription by binding within and obstructing the RNA polymerase secondary channel

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Donation of catalytic residues to RNA polymerase active center by transcription factor Gre

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Disulfide by Design™: a computational method for the rational design of disulfide bonds in proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

SWISS-MODEL: An automated protein homology-modeling server

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Promoting elongation with transcript cleavage stimulatory factors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

A high-transformation-efficiency cloning vector for Thermus thermophilus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

A thermophilic nitrate reductase is responsible for the strain specific anaerobic growth of Thermus thermophilus HB8.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Domain organization of Escherichia coli transcript cleavage factors GreA and GreB.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

A general two-metal-ion mechanism for catalytic RNA

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Crystal structure of the GreA transcript cleavage factor from Escherichia coli

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Improved methods for building protein models in electron density maps and the location of errors in these models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

A new type of NADH dehydrogenase specific for nitrate respiration in the extreme thermophile Thermus thermophilus

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Molecular mechanism of transcription inhibition by peptide antibiotic Microcin J25.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Binding to pyruvylated compounds as an ancestral mechanism to anchor the outer envelope in primitive bacteria

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

The pH dependence of CD2 domain 1 self-association and 15N chemical exchange broadening is correlated with the anomalous pKa of Glu41.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Regulation through the Secondary Channel—Structural Framework for ppGpp-DksA Synergism during Transcription

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Purification, crystallization and initial crystallographic analysis of RNA polymerase holoenzyme fromThermus thermophilus

9 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1462974

Biochemical assays of Gre factors of Thermus thermophilus

9 December 2018

1 reference

12 December 2020

Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS

1 reference

12 December 2020

Crystal structure of Thermus aquaticus Gfh1, a Gre-factor paralog that inhibits rather than stimulates transcript cleavage

1 reference

12 December 2020

DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP

1 reference

12 December 2020

Transcript cleavage by Thermus thermophilus RNA polymerase. Effects of GreA and anti-GreA factors

1 reference

12 December 2020

Identifiers

DOI

10.1038/SJ.EMBOJ.7601094

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16628221%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16628221%20AND%20SRC:MED&resulttype=core&format=json

19 January 2020

PubMed publication ID

16628221

1 reference