(Q34627486)

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GlycoPep Detector: a tool for assigning mass spectrometry data of N-linked glycopeptides on the basis of their electron transfer dissociation spectra

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

GlycoPep Detector: a tool for assigning mass spectrometry data of N-linked glycopeptides on the basis of their electron transfer dissociation spectra (English)

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

author name string

Zhikai Zhu

1

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

David Hua

2

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Daniel F Clark

3

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Eden P Go

4

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Heather Desaire

5

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

language of work or name

0 references

publication date

29 April 2013

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Analytical Chemistry

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

85

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

10

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

5023-5032

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

Fine tuning of cell signals by glycosylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

GlycoPep grader: a web-based utility for assigning the composition of N-linked glycopeptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Effective use of mass spectrometry for glycan and glycopeptide structural analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Semi-automated identification of N-Glycopeptides by hydrophilic interaction chromatography, nano-reverse-phase LC-MS/MS, and glycan database search

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Mutagenesis of surfactant protein D informed by evolution and x-ray crystallography enhances defenses against influenza A virus in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Comprehensive native glycan profiling with isomer separation and quantitation for the discovery of cancer biomarkers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Characterization of glycosylation profiles of HIV-1 transmitted/founder envelopes by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Mass spectrometry based glycoproteomics--from a proteomics perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Envelope glycans of immunodeficiency virions are almost entirely oligomannose antigens.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Chip-based reversed-phase liquid chromatography-mass spectrometry of permethylated N-linked glycans: a potential methodology for cancer-biomarker discovery.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Statistical analysis of Peptide electron transfer dissociation fragmentation mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Glycosylation site-specific analysis of clade C HIV-1 envelope proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Post-acquisition ETD spectral processing for increased peptide identifications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Characterization of glycopeptides by combining collision-induced dissociation and electron-transfer dissociation mass spectrometry data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Maximizing coverage of glycosylation heterogeneity in MALDI-MS analysis of glycoproteins with up to 27 glycosylation sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Factors that influence fragmentation behavior of N-linked glycopeptide ions.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

N-glycoproteomics - an automated workflow approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

"Glyco-peakfinder"--de novo composition analysis of glycoconjugates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Performance characteristics of electron transfer dissociation mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

N-Glycan structure annotation of glycopeptides using a linearized glycan structure database (GlyDB)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Comparison of the methods for profiling glycoprotein glycans--HUPO Human Disease Glycomics/Proteome Initiative multi-institutional study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Glycoproteomics based on tandem mass spectrometry of glycopeptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Complementary structural information from a tryptic N-linked glycopeptide via electron transfer ion/ion reactions and collision-induced dissociation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Hydrophilic affinity isolation and MALDI multiple-stage tandem mass spectrometry of glycopeptides for glycoproteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

GlycoMod--a software tool for determining glycosylation compositions from mass spectrometric data.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

7 July 2018

Improved peptide identification for proteomic analysis based on comprehensive characterization of electron transfer dissociation spectra

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

26 October 2018

When less can yield more - Computational preprocessing of MS/MS spectra for peptide identification.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

26 October 2018

Label-free quantitation: a new glycoproteomics approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

26 October 2018

De novo glycan structure search with the CID MS/MS spectra of native N-glycopeptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

26 October 2018

GlycoMiner: a new software tool to elucidate glycopeptide composition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

26 October 2018

Automated N-glycopeptide identification using a combination of single- and tandem-MS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

26 October 2018

Electron capture dissociation and infrared multiphoton dissociation MS/MS of an N-glycosylated tryptic peptic to yield complementary sequence information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3837445

26 October 2018

Homogeneous human complex-type oligosaccharides in correctly folded intact glycoproteins: evaluation of oligosaccharide influence on protein folding, stability, and conformational properties

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Collisional fragmentation of glycopeptides by electrospray ionization LC/MS and LC/MS/MS: methods for selective detection of glycopeptides in protein digests

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Glycobiology: more functions for oligosaccharides

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mass spectrometry-based glycomics strategy for exploring N-linked glycosylation in eukaryotes and bacteria.

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GlycoPep DB: a tool for glycopeptide analysis using a "Smart Search"

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Electron transfer dissociation of N-glycopeptides: loss of the entire N-glycosylated asparagine side chain

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Glycosylation of serum ribonuclease 1 indicates a major endothelial origin and reveals an increase in core fucosylation in pancreatic cancer

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

GlycoWorkbench: a tool for the computer-assisted annotation of mass spectra of glycans

1 reference

https://pubmed.ncbi.nlm.nih.gov/23510108

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/AC400287N

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

3 August 2017

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