(Q34659803)

3 August 2017

title

Cruciform-extruding regulatory element controls cell-specific activity of the tyrosine hydroxylase gene promoter (English)

1 reference

3 August 2017

E L Kim

1

1 reference

3 August 2017

H Peng

2

1 reference

3 August 2017

F M Esparza

3

1 reference

3 August 2017

S Z Maltchenko

4

1 reference

3 August 2017

M K Stachowiak

5

1 reference

3 August 2017

language of work or name

English

0 references

publication date

1 April 1998

1 reference

3 August 2017

published in

Nucleic Acids Research

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3 August 2017

volume

26

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3 August 2017

issue

7

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3 August 2017

page(s)

1793-1800

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Visualization of supercoiled DNA with atomic force microscopy in situ

3 August 2017

cites work

1 reference

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Regulation of PNMT gene promoter constructs transfected into the TE 671 human medulloblastoma cell line

7 July 2018

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Intricate regulation of tyrosine hydroxylase activity and gene expression

7 July 2018

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Promoter elements and second messenger pathways involved in transcriptional activation of tyrosine hydroxylase by ionomycin

7 July 2018

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The roles of CRE, TRE, and TRE-adjacent S1 nuclease sensitive element in the regulation of tyrosine hydroxylase gene promoter activity by angiotensin II.

7 July 2018

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Secondary structure creates mismatched base pairs required for high-affinity binding of cAMP response element-binding protein to the human enkephalin enhancer

7 July 2018

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QUAD, a protein from hepatocyte chromatin that binds selectively to guanine-rich quadruplex DNA.

7 July 2018

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Escherichia coli single-stranded DNA-binding protein alters the structure of intramolecular triplexes in plasmids.

7 July 2018

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Unusual DNA structures, chromatin and transcription

7 July 2018

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An S1 nuclease-sensitive region in the first intron of human platelet-derived growth factor A-chain gene contains a negatively acting cell type-specific regulatory element

7 July 2018

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A single promoter directs both housekeeping and erythroid preferential expression of the human ferrochelatase gene

7 July 2018

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Regulation of bFGF gene expression and subcellular distribution of bFGF protein in adrenal medullary cells

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Bovine tyrosine hydroxylase gene-promoter regions involved in basal and angiotensin II-stimulated expression in nontransformed adrenal medullary cells.

7 July 2018

1 reference

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A compilation and classification of DNA binding sites for protein transcription factors from vertebrates.

7 July 2018

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Repetitive Alu elements form a cruciform structure that regulates the function of the human CD8 alpha T cell-specific enhancer

7 July 2018

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Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure.

7 July 2018

1 reference

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A novel type of interaction between cruciform DNA and a cruciform binding protein from HeLa cells.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

The Cyclic AMP Response Element Directs Tyrosine Hydroxylase Expression in Catecholaminergic Central and Peripheral Nervous System Cell Lines from Transgenic Mice

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Detection and Partial Purification of a Cruciform-Resolving Activity (X-solvase) from Nuclear Extracts of Mouse B-Cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei

7 July 2018

1 reference

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Energetics of B-to-Z transition in DNA.

7 July 2018

1 reference

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Slow cruciform transitions in palindromic DNA.

7 July 2018

1 reference

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Single-stranded DNA binding proteins required for DNA replication

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

7 July 2018

Unusual DNA structures

1 reference

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Specific recognition of cruciform DNA by nuclear protein HMG1.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

The level of Z-DNA in metabolically active, permeabilized mammalian cell nuclei is regulated by torsional strain

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Transcription generates positively and negatively supercoiled domains in the template.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Isolation and structural characterization of the bovine tyrosine hydroxylase gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Hairpin formation within the enhancer region of the human enkephalin gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Short and long term regulation of catecholamine biosynthetic enzymes by angiotensin in cultured adrenal medullary cells. Molecular mechanisms and nature of second messenger systems

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

DNA cruciforms and the nuclear supporting structure

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Anti-cruciform DNA affinity purification of active mammalian origins of replication

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Formation of (dA-dT)n cruciforms in Escherichia coli cells under different environmental conditions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Inhibition and enhancement of eukaryotic gene expression by potential non-B DNA sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Supercoiled DNA and cruciform structures

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

5' flanking sequences of the rat tyrosine hydroxylase gene target accurate tissue-specific, developmental, and transsynaptic expression in transgenic mice

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Tissue-specific transcription of the rat tyrosine hydroxylase gene requires synergy between an AP-1 motif and an overlapping E box-containing dyad

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Sequences that direct rat tyrosine hydroxylase gene expression

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Transcription of human c-myc in permeabilized nuclei is associated with formation of Z-DNA in three discrete regions of the gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Protonated DNA structures

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Establishment of a human medulloblastoma cell line

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

Dramatic growth of mice that develop from eggs microinjected with metallothionein-growth hormone fusion genes

7 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2F26.7.1793

Regulation of tyrosine hydroxylase gene expression in depolarized non-transformed bovine adrenal medullary cells: second messenger systems and promoter mechanisms.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2F26.7.1793

5' upstream DNA sequence of the rat tyrosine hydroxylase gene directs high-level and tissue-specific expression to catecholaminergic neurons in the central nervous system of transgenic mice.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2F26.7.1793

Cyclic AMP-dependent protein kinase regulates basal and cyclic AMP-stimulated but not phorbol ester-stimulated transcription of the tyrosine hydroxylase gene

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147441

E. coli SSB activates N4 virion RNA polymerase promoters by stabilizing a DNA hairpin required for promoter recognition

26 October 2018

1 reference

12 December 2020

Chromosomal protein HMG1 removes the transcriptional block caused by the cruciform in supercoiled DNA

1 reference

12 December 2020

Probing DNA structure with osmium tetroxide complexes in vitro

1 reference

12 December 2020

Cruciform structures in palindromic DNA are favored by DNA supercoiling

1 reference

12 December 2020

Structures of DNA: a summary

1 reference

12 December 2020

Influence of DNA sequence on the formation of non-B right-handed helices in oligopurine.oligopyrimidine inserts in plasmids

1 reference

12 December 2020

Characterization of the binding specificity of two anticruciform DNA monoclonal antibodies

1 reference

12 December 2020

DNA structure determines protein binding and transcriptional efficiency of the proenkephalin cAMP-responsive enhancer

1 reference

12 December 2020

Anti-cruciform monoclonal antibody and cruciform DNA interaction

1 reference

12 December 2020

Cruciform DNA binding protein in HeLa cell extracts

1 reference

12 December 2020

A method for in vitro DNase I footprinting analysis on supercoiled templates

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/26.7.1793

1 reference

3 August 2017

1 reference

3 August 2017

1 reference