(Q34692161)

4 August 2017

title

Comparative transcriptome analysis of Methylibium petroleiphilum PM1 exposed to the fuel oxygenates methyl tert-butyl ether and ethanol (English)

1 reference

4 August 2017

0 references

Krassimira R Hristova

1

1 reference

4 August 2017

Radomir Schmidt

2

1 reference

4 August 2017

Anu Y Chakicherla

3

1 reference

4 August 2017

Tina C Legler

4

1 reference

4 August 2017

Janice Wu

5

1 reference

4 August 2017

Patrick S Chain

6

1 reference

4 August 2017

Kate M Scow

7

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4 August 2017

Staci R Kane

8

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4 August 2017

language of work or name

English

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publication date

21 September 2007

1 reference

Applied and Environmental Microbiology

4 August 2017

published in

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4 August 2017

volume

73

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4 August 2017

issue

22

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4 August 2017

page(s)

7347-7357

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describes a project that uses

4 August 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC2168209/fullTextXML

inferred from PubMed Central ID database lookup

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/2168209

inferred from PubMed Central ID database lookup

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Whole-genome analysis of the methyl tert-butyl ether-degrading beta-proteobacterium Methylibium petroleiphilum PM1.

7 July 2018

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7 July 2018

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Methylibium petroleiphilum gen. nov., sp. nov., a novel methyl tert-butyl ether-degrading methylotroph of the Betaproteobacteria

7 July 2018

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Genes involved in the methyl tert-butyl ether (MTBE) metabolic pathway of Mycobacterium austroafricanum IFP 2012.

7 July 2018

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7 July 2018

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MTBE and gasoline hydrocarbons in ground water of the United States

7 July 2018

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Comparison of biostimulation versus bioaugmentation with bacterial strain PM1 for treatment of groundwater contaminated with methyl tertiary butyl ether (MTBE)

7 July 2018

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The completely sequenced plasmid pEST4011 contains a novel IncP1 backbone and a catabolic transposon harboring tfd genes for 2,4-dichlorophenoxyacetic acid degradation

7 July 2018

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Oxidation of methyl tert-butyl ether by alkane hydroxylase in dicyclopropylketone-induced and n-octane-grown Pseudomonas putida GPo1.

7 July 2018

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7 July 2018

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Induction of methyl tertiary butyl ether (MTBE)-oxidizing activity in Mycobacterium vaccae JOB5 by MTBE

7 July 2018

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Cometabolism of methyl tertiary butyl ether and gaseous n-alkanes by Pseudomonas mendocina KR-1 grown on C5 to C8 n-alkanes

7 July 2018

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7 July 2018

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Naturally Occurring Bacteria Similar to the Methyl tert -Butyl Ether (MTBE)-Degrading Strain PM1 Are Present in MTBE-Contaminated Groundwater

7 July 2018

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Differential expression of the components of the two alkane hydroxylases from Pseudomonas aeruginosa

7 July 2018

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Summaries of Affymetrix GeneChip probe level data

7 July 2018

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Characterization of the initial reactions during the cometabolic oxidation of methyl tert-butyl ether by propane-grown Mycobacterium vaccae JOB5.

7 July 2018

1 reference

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

7 July 2018

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Gene expression analysis using oligonucleotide arrays produced by maskless photolithography

7 July 2018

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Differential expression of two catechol 1,2-dioxygenases in Burkholderia sp. strain TH2.

7 July 2018

1 reference

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MTBE (methyl tertiary-butyl ether) in groundwaters: monitoring results from Germany

7 July 2018

1 reference

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Functional analysis of alkane hydroxylases from gram-negative and gram-positive bacteria

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Utilization of L-ascorbate by Escherichia coli K-12: assignments of functions to products of the yjf-sga and yia-sgb operons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Aerobic biodegradation of methyl tert-butyl ether by aquifer bacteria from leaking underground storage tank sites

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Detection and quantification of methyl tert-butyl ether-degrading strain PM1 by real-time TaqMan PCR.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Toxicology and human health effects following exposure to oxygenated or reformulated gasoline

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Gene structures and regulation of the alkane hydroxylase complex in Acinetobacter sp. strain M-1.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Biodegradation of methyl tert-butyl ether by a bacterial pure culture.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

A functional 4-hydroxysalicylate/hydroxyquinol degradative pathway gene cluster is linked to the initial dibenzo-p-dioxin pathway genes in Sphingomonas sp. strain RW1.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Biodegradation of the gasoline oxygenates methyl tert-butyl ether, ethyl tert-butyl ether, and tert-amyl methyl ether by propane-oxidizing bacteria

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Physiological changes and alk gene instability in Pseudomonas oleovorans during induction and expression of alk genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Plasmid- and chromosome-mediated dissimilation of naphthalene and salicylate in Pseudomonas putida PMD-1

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Molecular cloning and DNA sequencing of the Escherichia coli K-12 ald gene encoding aldehyde dehydrogenase

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Oxidation of nitrotoluenes by toluene dioxygenase: evidence for a monooxygenase reaction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Impact of ethanol on the natural attenuation of MTBE in a normally sulfate-reducing aquifer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Effect of methyl tert-butyl ether in standard tests for mutagenicity and environmental toxicity.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

The alkyl tert-butyl ether intermediate 2-hydroxyisobutyrate is degraded via a novel cobalamin-dependent mutase pathway.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

The mutagenicity testing of tertiary-butyl alcohol, tertiary-butyl acetate and methyl tertiary-butyl ether in Salmonella typhimurium.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

The putative malate/lactate dehydrogenase from Pseudomonas putida is an NADPH-dependent delta1-piperideine-2-carboxylate/delta1-pyrroline-2-carboxylate reductase involved in the catabolism of D-lysine and D-proline.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Effect of in situ parameters on the enrichment process of MTBE degrading organisms.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Novel pollutant-resistant methylotrophic bacteria for use in bioremediation

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Small-volume releases of gasoline in the vadose zone: impact of the additives MTBE and ethanol on groundwater quality

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Molecular and functional characterization of the kstD2 gene of Rhodococcus erythropolis SQ1 encoding a second 3-ketosteroid Delta(1)-dehydrogenase isoenzyme

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Identification and characterization of the AgmR regulator of Pseudomonas putida: role in alcohol utilization

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Analysis of Pseudomonas putida alkane-degradation gene clusters and flanking insertion sequences: evolution and regulation of the alk genes

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Substrate interactions in BTEX and MTBE mixtures by an MTBE-degrading isolate

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2168209

Identification of catalytically essential residues in Escherichia coli esterase by site-directed mutagenesis

26 October 2018

1 reference

12 December 2020

Peer Reviewed: MTBE-To What Extent Will Past Releases Contaminate Community Water Supply Wells?

1 reference

12 December 2020

Involvement of lactaldehyde dehydrogenase in several metabolic pathways of Escherichia coli K12

1 reference

12 December 2020

Toxicity and carcinogenicity of t-butyl alcohol in rats and mice following chronic exposure in drinking water

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12 December 2020

Identifiers

DOI

10.1128/AEM.01604-07

1 reference

4 August 2017

1 reference

4 August 2017

1 reference