(Q34761063)

English

Quantitative analysis of polycomb response elements (PREs) at identical genomic locations distinguishes contributions of PRE sequence and genomic environment.

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Europe PubMed Central

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25 January 2020

Quantitative analysis of polycomb response elements (PREs) at identical genomic locations distinguishes contributions of PRE sequence and genomic environment (English)

1 reference

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21410956%20AND%20SRC:MED&resulttype=core&format=json

25 January 2020

1

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25 January 2020

author name string

Birgit Druck

2

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25 January 2020

Sheetal Bhalerao

3

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25 January 2020

Leonie Ringrose

4

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25 January 2020

publication date

16 March 2011

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25 January 2020

Epigenetics & Chromatin

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25 January 2020

4

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25 January 2020

4

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25 January 2020

https://scigraph.springernature.com/pub.10.1186/1756-8935-4-4

0 references

Insulators, not Polycomb response elements, are required for long-range interactions between Polycomb targets in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Systematic protein location mapping reveals five principal chromatin types in Drosophila cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

A region of the human HOXD cluster that confers polycomb-group responsiveness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Alternative epigenetic chromatin states of polycomb target genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

A vertebrate Polycomb response element governs segmentation of the posterior hindbrain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Functional anatomy of polycomb and trithorax chromatin landscapes in Drosophila embryos

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

The DNA-encoded nucleosome organization of a eukaryotic genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Alternative requirements for Vestigial, Scalloped, and Dmef2 during muscle differentiation in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Evolutionary plasticity of polycomb/trithorax response elements in Drosophila species

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Vestigial expression in the Drosophila embryonic central nervous system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Polycomb complexes and epigenetic states

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Replacement of a Drosophila Polycomb response element core, and in situ analysis of its DNA motifs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Transgenesis upgrades for Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

In situ dissection of a Polycomb response element in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Polycomb comes of age: genome-wide profiling of target sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

An optimized transgenesis system for Drosophila using germ-line-specific phiC31 integrases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Polycomb/Trithorax response elements and epigenetic memory of cell identity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Polycomb silencing mechanisms and the management of genomic programmes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Polycomb response elements and targeting of Polycomb group proteins in Drosophila.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Suz12 binds to silenced regions of the genome in a cell-type-specific manner

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Expression-guided in silico evaluation of candidate cis regulatory codes for Drosophila muscle founder cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Genome-wide analysis of Polycomb targets in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Control of developmental regulators by Polycomb in human embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Genome-wide profiling of PRC1 and PRC2 Polycomb chromatin binding in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Polycomb complexes repress developmental regulators in murine embryonic stem cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Genome-wide mapping of Polycomb target genes unravels their roles in cell fate transitions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Polycomb group-dependent Cyclin A repression in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Efficient and specific targeting of Polycomb group proteins requires cooperative interaction between Grainyhead and Pleiohomeotic.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Suppression of Polycomb group proteins by JNK signalling induces transdetermination in Drosophila imaginal discs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

An Sp1/KLF binding site is important for the activity of a Polycomb group response element from the Drosophila engrailed gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Transvection at the vestigial locus of Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Epigenetic regulation of cellular memory by the Polycomb and Trithorax group proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Isolation and characterization of CHRASCH, a polycomb-containing silencing complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Chromatin inheritance upon Zeste-mediated Brahma recruitment at a minimal cellular memory module

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Genome-wide prediction of Polycomb/Trithorax response elements in Drosophila melanogaster

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Inheritance of Polycomb-dependent chromosomal interactions in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Telomeric associated sequences of Drosophila recruit polycomb-group proteins in vivo and can induce pairing-sensitive repression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Transcription through intergenic chromosomal memory elements of the Drosophila bithorax complex correlates with an epigenetic switch

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

A cellular memory module conveys epigenetic inheritance of hedgehog expression during Drosophila wing imaginal disc development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

A complex array of DNA-binding proteins required for pairing-sensitive silencing by a polycomb group response element from the Drosophila engrailed gene.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Pairing-sensitive silencing, polycomb group response elements, and transposon homing in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Zeste maintains repression of Ubx transgenes: support for a new model of Polycomb repression.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Site-specific recognition of a 70-base-pair element containing d(GA)(n) repeats mediates bithoraxoid polycomb group response element-dependent silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Transvection and chromosomal trans-interaction effects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Homologous association of the Bithorax-Complex during embryogenesis: consequences for transvection in Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

A conserved sequence motif in Polycomb-response elements.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

The Drosophila Polycomb group gene pleiohomeotic encodes a DNA binding protein with homology to the transcription factor YY1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

A Polycomb and GAGA dependent silencer adjoins the Fab-7 boundary in the Drosophila bithorax complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Co-localization of Polycomb protein and GAGA factor on regulatory elements responsible for the maintenance of homeotic gene expression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Hunchback-independent silencing of late Ubx enhancers by a Polycomb Group Response Element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Organization of wing formation and induction of a wing-patterning gene at the dorsal/ventral compartment boundary.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Elements of the Drosophila bithorax complex that mediate repression by Polycomb group products.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Unusual properties of regulatory DNA from the Drosophila engrailed gene: three "pairing-sensitive" sites within a 1.6-kb region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

A Polycomb response element in the Ubx gene that determines an epigenetically inherited state of repression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Identification of Polycomb and trithorax group responsive elements in the regulatory region of the Drosophila homeotic gene Sex combs reduced

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Vectors for P-mediated transformation in Drosophila

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Trans-inactivation of the Drosophila brown gene: evidence for transcriptional repression and somatic pairing dependence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

Control of Drosophila wing and haltere development by the nuclear vestigial gene product

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

7 July 2018

The Drosophila Fab-7 chromosomal element conveys epigenetic inheritance during mitosis and meiosis.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

The Drosophila pho-like gene encodes a YY1-related DNA binding protein that is redundant with pleiohomeotic in homeotic gene silencing.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

A Drosophila Polycomb group complex includes Zeste and dTAFII proteins.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Recruitment of Drosophila Polycomb group proteins to chromatin by DSP1.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Regulation of polyhomeotic transcription may involve local changes in chromatin activity in Drosophila

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Identification and characterization of polyhomeotic PREs and TREs

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Control of apterous by vestigial drives indirect flight muscle development in Drosophila.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Dynamic regulation by polycomb group protein complexes controls pattern formation and the cell cycle in Drosophila.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

The role of Polycomb-group response elements in regulation of engrailed transcription in Drosophila

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Trans-sensing effects: the ups and downs of being together.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Integration of positional signals and regulation of wing formation and identity by Drosophila vestigial gene.

1 reference

https://api.crossref.org/works/10.1186%2F1756-8935-4-4

21 January 2018

Transgenesis in Drosophila melanogaster.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

26 October 2018

Polycomb group proteins and heritable silencing of Drosophila Hox genes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

26 October 2018

In situ dissection of the Fab-7 region of the bithorax complex into a chromatin domain boundary and a Polycomb-response element.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

26 October 2018

Discrete Polycomb-binding sites in each parasegmental domain of the bithorax complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3070613

26 October 2018

Identifiers

10.1186/1756-8935-4-4

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21410956%20AND%20SRC:MED&resulttype=core&format=json

25 January 2020

Dimensions Publication ID

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1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21410956%20AND%20SRC:MED&resulttype=core&format=json

25 January 2020

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21410956%20AND%20SRC:MED&resulttype=core&format=json

25 January 2020

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