(Q34777274)

4 August 2017

title

Modified curved DNA that could allow local DNA underwinding at the nucleosomal pseudodyad fails to position a nucleosome in vivo (English)

1 reference

4 August 2017

Patterton HG

1

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4 August 2017

Simpson RT

series ordinal

2

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4 August 2017

language of work or name

English

0 references

publication date

1 October 1995

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4 August 2017

published in

Nucleic Acids Research

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4 August 2017

volume

23

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4 August 2017

issue

20

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4 August 2017

page(s)

4170-4179

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Topography of the histone octamer surface: repeating structural motifs utilized in the docking of nucleosomal DNA

4 August 2017

cites work

1 reference

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7 July 2018

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Nucleosomal location of the STE6 TATA box and Mat alpha 2p-mediated repression

7 July 2018

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Architectural variations of inducible eukaryotic promoters: preset and remodeling chromatin structures

7 July 2018

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Sequence-dependent anisotropic flexibility of B-DNA. A conformational study

7 July 2018

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7 July 2018

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The helical periodicity of DNA on the nucleosome

7 July 2018

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DNase II digestion of the nucleosome core: precise locations and relative exposures of sites

7 July 2018

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Chromatin structure; oligomers of the histones

7 July 2018

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Reconstitution experiments show that sequence-specific histone-DNA interactions are the basis for nucleosome phasing on mouse satellite DNA.

7 July 2018

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DNA bending and its relation to nucleosome positioning.

7 July 2018

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Sequence periodicities in chicken nucleosome core DNA.

7 July 2018

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Sequence-specific positioning of core histones on an 860 base-pair DNA. Experiment and theory.

7 July 2018

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Principles of sequence-dependent flexure of DNA.

7 July 2018

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UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases

7 July 2018

1 reference

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Precise nucleosome positioning in the promoter of the chicken beta A globin gene

7 July 2018

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A general method of in vitro preparation and specific mutagenesis of DNA fragments: study of protein and DNA interactions

7 July 2018

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Temperature and salt dependence of the gel migration anomaly of curved DNA fragments

7 July 2018

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DNA engineering shows that nucleosome phasing on the African green monkey alpha-satellite is the result of multiple additive histone-DNA interactions

7 July 2018

1 reference

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Chromatin reconstituted from tandemly repeated cloned DNA fragments and core histones: a model system for study of higher order structure

7 July 2018

1 reference

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The bending of DNA in nucleosomes and its wider implications

7 July 2018

1 reference

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Artificial nucleosome positioning sequences

7 July 2018

1 reference

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Formation, stability and core histone positioning of nucleosomes reassembled on bent and other nucleosome-derived DNA.

7 July 2018

1 reference

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Asymmetry and polarity of nucleosomes in chicken erythrocyte chromatin.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Initiation of transcription on nucleosomal templates

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Sequence-directed curvature of DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Role of trans-activating proteins in the generation of active chromatin at the PHO5 promoter in S. cerevisiae.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Poly(dA).poly(dT) rich sequences are not sufficient to exclude nucleosome formation in a constitutive yeast promoter

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

A relational database of transcription factors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Yeast alpha 2 repressor positions nucleosomes in TRP1/ARS1 chromatin

7 July 2018

1 reference

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Attraction, phasing and neighbour effects of histone octamers on curved DNA.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

The structure of DNA in a nucleosome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Nucleosome positioning: occurrence, mechanisms, and functional consequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

DMSO-enhanced whole cell yeast transformation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Artificial nucleosome positioning sequences tested in yeast minichromosomes: a strong rotational setting is not sufficient to position nucleosomes in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Multifunctional yeast high-copy-number shuttle vectors

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Structure of nucleosome core particles of chromatin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Core nucleosomes by digestion of reconstructed histone-DNA complexes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Precise location of DNase I cutting sites in the nucleosome core determined by high resolution gel electrophoresis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Folding of the DNA double helix in chromatin-like structures from simian virus 40

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=307359

Local protein–DNA interactions may determine nucleosome positions on yeast plasmids

7 July 2018

1 reference

12 December 2020

Effects of DNA sequence and histone-histone interactions on nucleosome placement

1 reference

12 December 2020

Can one measure the free energy of binding of the histone octamer to different DNA sequences by salt-dependent reconstitution?

1 reference

12 December 2020

Negative supercoiling and nucleosome cores. II. The effect of negative supercoiling on the positioning of nucleosome cores in vitro

1 reference

12 December 2020

The terminus of SV40 DNA replication and transcription contains a sharp sequence-directed curve

1 reference

12 December 2020

A decapeptide motif for binding to the minor groove of DNA. A proposal

1 reference

12 December 2020

Chromatin folding modulates nucleosome positioning in yeast minichromosomes

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/23.20.4170

1 reference

4 August 2017

1 reference

4 August 2017

1 reference