(Q34795707)

English

An experimental and computational evolution-based method to study a mode of co-evolution of overlapping open reading frames in the AAV2 viral genome

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

An experimental and computational evolution-based method to study a mode of co-evolution of overlapping open reading frames in the AAV2 viral genome (English)

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

0 references

author name string

Yasuhiro Kawano

1

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Shane Neeley

2

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Kei Adachi

3

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Hiroyuki Nakai

4

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

language of work or name

0 references

publication date

24 June 2013

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

e66211

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

copyright license

Creative Commons Attribution 4.0 International

24 June 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

Properties of the adeno-associated virus assembly-activating protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Computational identification of novel amino-acid interactions in HIV Gag via correlated evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Evolution of viral proteins originated de novo by overprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Directed evolution of novel adeno-associated viruses for therapeutic gene delivery.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Adenovirus-associated virus vector-mediated gene transfer in hemophilia B

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

The assembly-activating protein promotes capsid assembly of different adeno-associated virus serotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

A NEW RECOMBINANT ADENO-ASSOCIATED VIRUS (AAV)-BASED RANDOM PEPTIDE DISPLAY LIBRARY SYSTEM: INFECTION-DEFECTIVE AAV1.9-3 AS A NOVEL DETARGETED PLATFORM FOR VECTOR EVOLUTION.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

A viral assembly factor promotes AAV2 capsid formation in the nucleolus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Evidence for ribosomal frameshifting and a novel overlapping gene in the genomes of insect-specific flaviviruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

A potentially novel overlapping gene in the genomes of Israeli acute paralysis virus and its relatives

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Overlapping genes produce proteins with unusual sequence properties and offer insight into de novo protein creation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

A computational approach identifies two regions of Hepatitis C Virus E1 protein as interacting domains involved in viral fusion process

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Accurate whole human genome sequencing using reversible terminator chemistry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Identification of genetic variants using bar-coded multiplexed sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Safety and efficacy of gene transfer for Leber's congenital amaurosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

In vitro and in vivo gene therapy vector evolution via multispecies interbreeding and retargeting of adeno-associated viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Dissecting protein structure and function using directed evolution.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

A novel method for detecting intramolecular coevolution: adding a further dimension to selective constraints analyses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Successful transduction of liver in hemophilia by AAV-Factor IX and limitations imposed by the host immune response

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Exploiting heterogeneous sequence properties improves prediction of protein disorder.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

ConSurf: identification of functional regions in proteins by surface-mapping of phylogenetic information

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Evolutionary computation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Mutational analysis of the adeno-associated virus type 2 (AAV2) capsid gene and construction of AAV2 vectors with altered tropism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Detection of signature sequences in overlapping genes and prediction of a novel overlapping gene in hepatitis G virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Coexpression of factor VIII heavy and light chain adeno-associated viral vectors produces biologically active protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Identification and application of the concepts important for accurate and reliable protein secondary structure prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Covariation of mutations in the V3 loop of human immunodeficiency virus type 1 envelope protein: an information theoretic analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

A simple method for displaying the hydropathic character of a protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Origins of genes: "big bang" or continuous creation?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Evolution of overlapping genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3691236

8 July 2018

Why genes overlap in viruses.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066211

21 January 2018

Origin and evolution of overlapping genes in the family Microviridae

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066211

21 January 2018

Detecting overlapping coding sequences with pairwise alignments.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066211

21 January 2018

Dystrophin immunity in Duchenne's muscular dystrophy.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066211

21 January 2018

Molecular coevolution of kisspeptins and their receptors from fish to mammals

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066211

21 January 2018

Preclinical in vivo evaluation of pseudotyped adeno-associated virus vectors for liver gene therapy

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066211

21 January 2018

A Study of the Coevolutionary Patterns Operating within the env Gene of the HIV-1 Group M Subtypes

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0066211

21 January 2018

On the informational content of overlapping genes in prokaryotic and eukaryotic viruses

1 reference

https://pubmed.ncbi.nlm.nih.gov/23826091

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0066211

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

2013PLoSO...866211K

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q34795707&oldid=1864564895"