(Q34930078)

5 August 2017

title

MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource for plant genomics (English)

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5 August 2017

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Heiko Schoof

1

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5 August 2017

Rebecca Ernst

2

1 reference

5 August 2017

Vladimir Nazarov

3

1 reference

5 August 2017

Lukas Pfeifer

4

1 reference

5 August 2017

Hans-Werner Mewes

5

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5 August 2017

Klaus F X Mayer

6

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5 August 2017

language of work or name

English

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publication date

1 January 2004

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5 August 2017

published in

Nucleic Acids Research

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5 August 2017

volume

32

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5 August 2017

issue

Database issue

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5 August 2017

page(s)

D373-6

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Towards Interoperability in Genome Databases: The MAtDB (MIPS Arabidopsis Thaliana Database) Experience.

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

MIPS: analysis and annotation of proteins from whole genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Genome-wide insertional mutagenesis of Arabidopsis thaliana

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Comparison of rice and Arabidopsis annotation.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Apollo: a sequence annotation editor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Rfam: an RNA family database

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

MOsDB: an integrated information resource for rice genomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Sputnik: a database platform for comparative plant genomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

BioMOBY: an open source biological web services proposal

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Full-length messenger RNA sequences greatly improve genome annotation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Functional annotation of a full-length Arabidopsis cDNA collection

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Computational gene finding in plants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource based on the first complete plant genome.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Refined annotation of the Arabidopsis genome by complete expressed sequence tag mapping

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=308802

Optimal spliced alignment of homologous cDNA to a genomic DNA template

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/14681437

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKH068

1 reference

journals/nar/SchoofENPMM04

5 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

release_ibbu7g46szfpppwuurtk2pdmve

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/ibbu7g46szfpppwuurtk2pdmve

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMC publication ID

308802

1 reference

5 August 2017

1 reference