(Q34934889)

5 August 2017

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title

Repair of deaminated bases in DNA. (English)

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5 August 2017

main subject

5-(Hydroxymethyl)uracil

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ChEBI release 2020-05-28

Yoke W Kow

1

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5 August 2017

publication date

1 October 2002

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Free Radical Biology and Medicine

5 August 2017

published in

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5 August 2017

volume

33

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5 August 2017

issue

7

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5 August 2017

page(s)

886-893

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The reaction of ribonucleosides with nitrous acid. Side products and kinetics

5 August 2017

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7 January 2021

Reaction of nitrous acid with alkylaminopurines

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7 January 2021

DNA damage in human respiratory tract epithelial cells: damage by gas phase cigarette smoke apparently involves attack by reactive nitrogen species in addition to oxygen radicals

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7 January 2021

Base modification and strand breakage in isolated calf thymus DNA and in DNA from human skin epidermal keratinocytes exposed to peroxynitrite or 3-morpholinosydnonimine

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7 January 2021

DNA base modifications in renal chromatin of Wistar rats treated with a renal carcinogen, ferric nitrilotriacetate.

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7 January 2021

Nitrite-induced deamination and hypochlorite-induced oxidation of DNA in intact human respiratory tract epithelial cells

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7 January 2021

Oxidized, deaminated cytosines are a source of C --> T transitions in vivo

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7 January 2021

5-Hydroxypyrimidine deoxynucleoside triphosphates are more efficiently incorporated into DNA by exonuclease-free Klenow fragment than 8-oxopurine deoxynucleoside triphosphates

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7 January 2021

Asymmetric cytosine deamination revealed by spontaneous mutational specificity in an Ung- strain of Escherichia coli.

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7 January 2021

Kinetics of bisulfite-induced cytosine deamination in single-stranded DNA.

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7 January 2021

Structures and functions of DNA glycosylases

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7 January 2021

An N -Glycosidase from Escherichia coli That Releases Free Uracil from DNA Containing Deaminated Cytosine Residues

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7 January 2021

Nuclear and mitochondrial forms of human uracil-DNA glycosylase are encoded by the same gene

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7 January 2021

Regulation of expression of nuclear and mitochondrial forms of human uracil-DNA glycosylase

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7 January 2021

A novel activity of E. coli uracil DNA N-glycosylase excision of isodialuric acid (5,6-dihydroxyuracil), a major product of oxidative DNA damage, from DNA.

1 reference

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7 January 2021

Crystal structure and mutational analysis of human uracil-DNA glycosylase: structural basis for specificity and catalysis

1 reference

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7 January 2021

A nucleotide-flipping mechanism from the structure of human uracil-DNA glycosylase bound to DNA

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7 January 2021

The structural basis of specific base-excision repair by uracil-DNA glycosylase

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7 January 2021

Escherichia coli uracil DNA glycosylase: NMR characterization of the short hydrogen bond from His187 to uracil O2.

1 reference

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7 January 2021

Kinetic isotope effect studies of the reaction catalyzed by uracil DNA glycosylase: evidence for an oxocarbenium ion-uracil anion intermediate

1 reference

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7 January 2021

Crystal structure of a G:T/U mismatch-specific DNA glycosylase: mismatch recognition by complementary-strand interactions

1 reference

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7 January 2021

The role of the Escherichia coli mug protein in the removal of uracil and 3,N(4)-ethenocytosine from DNA.

1 reference

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7 January 2021

Efficient removal of uracil from G.U mispairs by the mismatch-specific thymine DNA glycosylase from HeLa cells

1 reference

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7 January 2021

Crystal structure of a thwarted mismatch glycosylase DNA repair complex

1 reference

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7 January 2021

3,N4-ethenocytosine, a highly mutagenic adduct, is a primary substrate for Escherichia coli double-stranded uracil-DNA glycosylase and human mismatch-specific thymine-DNA glycosylase

1 reference

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7 January 2021

Characterization of free radical-induced base damage in DNA at biologically relevant levels

1 reference

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7 January 2021

Major oxidative products of cytosine, 5-hydroxycytosine and 5-hydroxyuracil, exhibit sequence context-dependent mispairing in vitro.

1 reference

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7 January 2021

Characterization ofEscherichia coliEndonuclease VIII

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7 January 2021

The enzymology of apurinic/apyrimidinic endonucleases

1 reference

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7 January 2021

Novel DNA binding motifs in the DNA repair enzyme endonuclease III crystal structure

1 reference

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7 January 2021

Substrate specificity of the Escherichia coli endonuclease III: excision of thymine- and cytosine-derived lesions in DNA produced by radiation-generated free radicals

1 reference

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7 January 2021

Novel substrates of Escherichia coli nth protein and its kinetics for excision of modified bases from DNA damaged by free radicals

1 reference

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7 January 2021

Substrate specificity and excision kinetics of Escherichia coli endonuclease VIII (Nei) for modified bases in DNA damaged by free radicals

1 reference

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7 January 2021

Stereochemical studies of the beta-elimination reactions at aldehydic abasic sites in DNA: endonuclease III from Escherichia coli, sodium hydroxide, and Lys-Trp-Lys

1 reference

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7 January 2021

Hydroxymethyluracil DNA glycosylase in mammalian cells

1 reference

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7 January 2021

Oxidative damage to 5-methylcytosine in DNA.

1 reference

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7 January 2021

An unexpectedly high excision capacity for mispaired 5-hydroxymethyluracil in human cell extracts

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7 January 2021

Phylogenetic evidence of a role for 5-hydroxymethyluracil-DNA glycosylase in the maintenance of 5-methylcytosine in DNA.

1 reference

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7 January 2021

A mammalian cell line deficient in activity of the DNA repair enzyme 5-hydroxymethyluracil-DNA glycosylase is resistant to the toxic effects of the thymidine analog 5-hydroxymethyl-2'-deoxyuridine

1 reference

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7 January 2021

Very short patch repair: reducing the cost of cytosine methylation

1 reference

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7 January 2021

Crystallographic and functional studies of very short patch repair endonuclease

1 reference

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7 January 2021

Recognition of a TG mismatch: the crystal structure of very short patch repair endonuclease in complex with a DNA duplex

1 reference

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7 January 2021

Biphasic kinetics of the human DNA repair protein MED1 (MBD4), a mismatch-specific DNA N-glycosylase

1 reference

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7 January 2021

Investigation of the substrate spectrum of the human mismatch-specific DNA N-glycosylase MED1 (MBD4): fundamental role of the catalytic domain

1 reference

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7 January 2021

Thymine-DNA glycosylase and G to A transition mutations at CpG sites

1 reference

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7 January 2021

Refined crystal structure of an octanucleotide duplex with I.T. mismatched base pairs

1 reference

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7 January 2021

Crystal structure of a B-DNA dodecamer containing inosine, d(CGCIAATTCGCG), at 2.4 A resolution and its comparison with other B-DNA dodecamers

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Hypoxanthine in deoxyribonucleic acid: generation by heat-induced hydrolysis of adenine residues and release in free form by a deoxyribonucleic acid glycosylase from calf thymus

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Excision of hypoxanthine from DNA containing dIMP residues by the Escherichia coli, yeast, rat, and human alkylpurine DNA glycosylases

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Interactions of the human, rat, Saccharomyces cerevisiae and Escherichia coli 3-methyladenine-DNA glycosylases with DNA containing dIMP residues

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

The type of DNA glycosylase determines the base excision repair pathway in mammalian cells

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Interaction of the recombinant human methylpurine-DNA glycosylase (MPG protein) with oligodeoxyribonucleotides containing either hypoxanthine or abasic sites

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Cleavage of insertion/deletion mismatches, flap and pseudo-Y DNA structures by deoxyinosine 3'-endonuclease from Escherichia coli.

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

nfi, the gene for endonuclease V in Escherichia coli K-12.

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Interaction of deoxyinosine 3'-endonuclease from Escherichia coli with DNA containing deoxyinosine

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Deoxyxanthosine in DNA is repaired by Escherichia coli endonuclease V

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Endonuclease V (nfi) mutant of Escherichia coli K-12

1 reference

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7 January 2021

Endonuclease V protects Escherichia coli against specific mutations caused by nitrous acid.

1 reference

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7 January 2021

Effects of nitrous acid treatment on the survival and mutagenesis of Escherichia coli cells lacking base excision repair (hypoxanthine-DNA glycosylase-ALK A protein) and/or nucleotide excision repair.

1 reference

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7 January 2021

A deoxyinosine specific endonuclease from hyperthermophile, Archaeoglobus fulgidus: a homolog of Escherichia coli endonuclease V

1 reference

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7 January 2021

Multiple cleavage activities of endonuclease V from Thermotoga maritima: recognition and strand nicking mechanism

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7 January 2021

Very short patch repair of T:G mismatches in vivo: importance of context and accessory proteins

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Structure and function of the (A)BC excinuclease of Escherichia coli

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

In vitro reconstitution of the Schizosaccharomyces pombe alternative excision repair pathway

1 reference

https://api.crossref.org/works/10.1016%2FS0891-5849%2802%2900902-4

7 January 2021

Conserved domains in DNA repair proteins and evolution of repair systems

1 reference

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7 January 2021

10.1016/S0891-5849(02)00902-4

Identifiers

DOI

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5 August 2017

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