(Q34941042)

5 August 2017

title

The influence of gene flow on species tree estimation: a simulation study (English)

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5 August 2017

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1

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5 August 2017

Rebecca B Harris

2

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5 August 2017

Bruce Rannala

series ordinal

3

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5 August 2017

Ziheng Yang

series ordinal

4

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5 August 2017

language of work or name

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13 August 2013

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5 August 2017

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5 August 2017

volume

63

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5 August 2017

issue

1

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5 August 2017

page(s)

17-30

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Multilocus phylogeography and phylogenetics using sequence-based markers

5 August 2017

cites work

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

Accuracy and precision of species trees: effects of locus, individual, and base pair sampling on inference of species trees in lizards of the Liolaemus darwinii group (Squamata, Liolaemidae).

21 January 2018

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Integrating phylogenetic and population genetic analyses of multiple loci to test species divergence hypotheses in Passerina buntings

21 January 2018

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Species delimitation using a combined coalescent and information-theoretic approach: an example from North American Myotis bats

21 January 2018

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Estimating species phylogeny from gene-tree probabilities despite incomplete lineage sorting: an example from Melanoplus grasshoppers

21 January 2018

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Joint inference of population assignment and demographic history

21 January 2018

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Comparing two Bayesian methods for gene tree/species tree reconstruction: simulations with incomplete lineage sorting and horizontal gene transfer.

21 January 2018

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Discordance of species trees with their most likely gene trees.

21 January 2018

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Gene tree discordance, phylogenetic inference and the multispecies coalescent

21 January 2018

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Does gene flow destroy phylogenetic signal? The performance of three methods for estimating species phylogenies in the presence of gene flow

21 January 2018

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Is a new and general theory of molecular systematics emerging?

21 January 2018

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SpedeSTEM: a rapid and accurate method for species delimitation.

21 January 2018

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Computer programs for population genetics data analysis: a survival guide

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Estimating hybridization in the presence of coalescence using phylogenetic intraspecific sampling

21 January 2018

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Field guide to next-generation DNA sequencers

21 January 2018

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Simulating gene trees under the multispecies coalescent and time-dependent migration

21 January 2018

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Bayesian inference of species trees from multilocus data

21 January 2018

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Isolation with migration models for more than two populations

21 January 2018

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Multilocus methods for estimating population sizes, migration rates and divergence time, with applications to the divergence of Drosophila pseudoobscura and D. persimilis

21 January 2018

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Population genomics of parallel adaptation in threespine stickleback using sequenced RAD tags

21 January 2018

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TESTING THE CONSTANT-RATE NEUTRAL ALLELE MODEL WITH PROTEIN SEQUENCE DATA.

21 January 2018

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Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models

21 January 2018

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A statistical approach for distinguishing hybridization and incomplete lineage sorting.

21 January 2018

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Delimiting species without monophyletic gene trees

21 January 2018

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Coalescent genealogy samplers: windows into population history

21 January 2018

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Species tree discordance traces to phylogeographic clade boundaries in North American fence lizards (Sceloporus)

21 January 2018

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The accuracy of species tree estimation under simulation: a comparison of methods

21 January 2018

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A species tree for the Australo-Papuan Fairy-wrens and allies (Aves: Maluridae).

21 January 2018

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21 January 2018

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21 January 2018

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A maximum pseudo-likelihood approach for estimating species trees under the coalescent model

21 January 2018

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Coalescent methods for estimating phylogenetic trees

21 January 2018

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Inferring phylogeny despite incomplete lineage sorting

21 January 2018

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Maximum likelihood estimates of species trees: how accuracy of phylogenetic inference depends upon the divergence history and sampling design

21 January 2018

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Detecting hybrid speciation in the presence of incomplete lineage sorting using gene tree incongruence: a model.

21 January 2018

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AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics

21 January 2018

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Phylogenetic inference using whole genomes

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

Recent and rapid speciation with limited morphological disparity in the genus Rattus

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

Testing hybridization hypotheses based on incongruent gene trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

Subdivision in an ancestral species creates asymmetry in gene trees

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

A genome-wide perspective on the evolutionary history of enigmatic wolf-like canids

21 January 2018

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Mother species-father species: unidirectional hybridization in animals with female choice

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

A likelihood ratio test of speciation with gene flow using genomic sequence data

21 January 2018

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https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

Bayesian species delimitation using multilocus sequence data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

The probability of a gene tree topology within a phylogenetic network with applications to hybridization detection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

Evaluation of a bayesian coalescent method of species delimitation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

Difficulties in Detecting Hybridization

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYT049

21 January 2018

Identifiers

DOI

10.1093/SYSBIO/SYT049

1 reference

5 August 2017

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