(Q35006529)

English

Modeling bacterial evolution with comparative-genome-based marker systems: application to Mycobacterium tuberculosis evolution and pathogenesis

scientific article

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scholarly article

1 reference

Europe PubMed Central

5 August 2017

Modeling bacterial evolution with comparative-genome-based marker systems: application to Mycobacterium tuberculosis evolution and pathogenesis (English)

1 reference

Europe PubMed Central

5 August 2017

0 references

Mycobacterium tuberculosis

0 references

0 references

bacterial evolution

1 reference

based on heuristic

inferred from title

Jonathan A. Eisen

9

1 reference

Europe PubMed Central

5 August 2017

Claire M. Fraser

10

1 reference

Europe PubMed Central

5 August 2017

author name string

David Alland

1

1 reference

Europe PubMed Central

5 August 2017

Thomas S Whittam

2

1 reference

Europe PubMed Central

5 August 2017

Megan B Murray

3

1 reference

Europe PubMed Central

5 August 2017

M Donald Cave

4

1 reference

Europe PubMed Central

5 August 2017

Manzour H Hazbon

5

1 reference

Europe PubMed Central

5 August 2017

Kim Dix

6

1 reference

Europe PubMed Central

5 August 2017

Mark Kokoris

7

1 reference

Europe PubMed Central

5 August 2017

Andreas Duesterhoeft

8

1 reference

Europe PubMed Central

5 August 2017

Robert D Fleischmann

11

1 reference

Europe PubMed Central

5 August 2017

language of work or name

0 references

publication date

1 June 2003

1 reference

Europe PubMed Central

5 August 2017

Journal of Bacteriology

1 reference

Europe PubMed Central

5 August 2017

185

1 reference

Europe PubMed Central

5 August 2017

3392-3399

1 reference

Europe PubMed Central

5 August 2017

11

1 reference

Europe PubMed Central

5 August 2017

Whole-genome comparison of Mycobacterium tuberculosis clinical and laboratory strains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Genomic deletions suggest a phylogeny for the Mycobacterium tuberculosis complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Comparative genome sequencing for discovery of novel polymorphisms in Bacillus anthracis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Calculation of the stability of the IS6110 banding pattern in patients with persistent Mycobacterium tuberculosis disease

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

A new evolutionary scenario for the Mycobacterium tuberculosis complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Molecular evolution of Mycobacterium tuberculosis: phylogenetic reconstruction of clonal expansion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Automated high-throughput genotyping for study of global epidemiology of Mycobacterium tuberculosis based on mycobacterial interspersed repetitive units

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

MRBAYES: Bayesian inference of phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Ecological physiology of Synechococcus sp. strain SH-94-5, a naturally occurring cyanobacterium deficient in nitrate assimilation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Consequences of recombination on traditional phylogenetic analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

False molecular clusters due to nonrandom association of IS6110 with Mycobacterium tuberculosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Distinctiveness of genotypes of Helicobacter pylori in Calcutta, India

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Differences in genotypes of Helicobacter pylori from different human populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Genotypic analysis of Mycobacterium tuberculosis in two distinct populations using molecular beacons: implications for rapid susceptibility testing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Contribution of kasA analysis to detection of isoniazid-resistant Mycobacterium tuberculosis in Singapore

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

IS6110-mediated deletions of wild-type chromosomes of Mycobacterium tuberculosis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Nonrandom association of IS6110 and Mycobacterium tuberculosis: implications for molecular epidemiological studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Evaluation of spoligotyping in a study of the transmission of Mycobacterium tuberculosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Genotypic assessment of isoniazid and rifampin resistance in Mycobacterium tuberculosis: a blind study at reference laboratory level.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Accurate reconstruction of a known HIV-1 transmission history by phylogenetic tree analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Re-emergence of epidemic Venezuelan equine encephalomyelitis in South America. VEE Study Group

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Detecting selective sweeps in naturally occurring Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Molecular epidemiology of HIV transmission in a dental practice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

8 July 2018

Genomics and microbiology. Microbial forensics--"cross-examining pathogens".

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

26 October 2018

Inhibition of a Mycobacterium tuberculosis beta-ketoacyl ACP synthase by isoniazid.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

26 October 2018

Revealing the history of infectious disease epidemics through phylogenetic trees

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

26 October 2018

Transmission of Tuberculosis in New York City -- An Analysis by DNA Fingerprinting and Conventional Epidemiologic Methods

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155390

9 December 2018

Widespread dissemination of a drug-susceptible strain of Mycobacterium tuberculosis

1 reference

https://pubmed.ncbi.nlm.nih.gov/12754238

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Properties of a neutral allele model with intragenic recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/12754238

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.185.11.3392-3399.2003

1 reference

Europe PubMed Central

5 August 2017

1 reference

Europe PubMed Central

5 August 2017

1 reference

Europe PubMed Central

5 August 2017

ResearchGate publication ID

0 references

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