(Q35013239)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

title

Structure of deviations from optimality in biological systems (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

author

Alfonso Pérez-Escudero

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Marta Rivera-Alba

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

Gonzalo G de Polavieja

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

author name string

Alfonso Pérez-Escudero

1

1 reference

5 August 2017

Marta Rivera-Alba

2

1 reference

5 August 2017

Gonzalo G de Polavieja

3

1 reference

5 August 2017

language of work or name

English

0 references

publication date

16 November 2009

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

Proceedings of the National Academy of Sciences of the United States of America

12 February 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

volume

106

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

issue

48

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

page(s)

20544-20549

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

The Structure of the Nervous System of the Nematode Caenorhabditis elegans

12 February 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

THE PHYSIOLOGICAL PRINCIPLE OF MINIMUM WORK APPLIED TO THE ANGLE OF BRANCHING OF ARTERIES.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Information flow and optimization in transcriptional regulation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Optimally wired subnetwork determines neuroanatomy of Caenorhabditis elegans

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Optimization by Simulated Annealing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Systematic evaluation of objective functions for predicting intracellular fluxes in Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

The genetic code is nearly optimal for allowing additional information within protein-coding sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Nonoptimal component placement, but short processing paths, due to long-distance projections in neural systems

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

The Physiological Principle of Minimum Work: I. The Vascular System and the Cost of Blood Volume

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Wiring optimization can relate neuronal structure and function

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Nonlinear dependency of intracellular fluxes on growth rate in miniaturized continuous cultures of Escherichia coli

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Optimality and evolutionary tuning of the expression level of a protein

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Interneuron Diversity series: Circuit complexity and axon wiring economy of cortical interneurons

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Connectivity optimization and the positioning of cortical areas

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Escherichia coli K-12 undergoes adaptive evolution to achieve in silico predicted optimal growth

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Analysis of optimality in natural and perturbed metabolic networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

In silico predictions of Escherichia coli metabolic capabilities are consistent with experimental data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

The genetic code is one in a million

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

On connecting large vessels to small. The meaning of Murray's law

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

The posterior nervous system of the nematode Caenorhabditis elegans: serial reconstruction of identified neurons and complete pattern of synaptic interactions.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Optimal foraging in patches: A case for stochasticity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Optimality theory in evolutionary biology

8 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0905336106

Architecture of the human lung. Use of quantitative methods establishes fundamental relations between size and number of lung structures

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1073%2FPNAS.0905336106

Wiring optimization in cortical circuits

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2777958

Exact solution for the optimal neuronal layout problem

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19918070

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

A simple coding procedure enhances a neuron's information capacity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19918070

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Errors drive the evolution of biological signalling to costly codes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19918070

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0905336106

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

0 references

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19918070%20AND%20SRC:MED&resulttype=core&format=json

12 February 2020

1 reference