Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q35022572)
Watch
English
Measuring the evolution of ontology complexity: the gene ontology case study.
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
title
Measuring the evolution of ontology complexity: the gene ontology case study
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
main subject
ontology
0 references
Gene Ontology
1 reference
based on heuristic
inferred from title
author
Charles Bettembourg
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
Nolwenn Le Meur
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
author name string
Olivier Dameron
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
language of work or name
English
0 references
publication date
11 October 2013
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
published in
PLOS One
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
volume
8
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
issue
10
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
page(s)
e75993
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
copyright license
Creative Commons Attribution 4.0 International
start time
11 October 2013
1 reference
stated in
April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
cites work
Improving the measurement of semantic similarity between gene ontology terms and gene products: insights from an edge- and IC-based hybrid method
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Interactive ontology debugging: Two query strategies for efficient fault localization
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Assessing identity, redundancy and confounds in Gene Ontology annotations over time
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Gene Ontology annotations and resources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Evaluation of research in biomedical ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Impact of ontology evolution on functional analyses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Mining GO annotations for improving annotation consistency
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Measuring the level of activity in community built bio-ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Logical Gene Ontology Annotations (GOAL): exploring gene ontology annotations with OWL
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Improving GO semantic similarity measures by exploring the ontology beneath the terms and modelling uncertainty
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
CODEX: exploration of semantic changes between ontology versions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Improving ontologies by automatic reasoning and evaluation of logical definitions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
GOMMA: a component-based infrastructure for managing and analyzing life science ontologies and their evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
How the gene ontology evolves
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Getting the foot out of the pelvis: modeling problems affecting use of SNOMED CT hierarchies in practical applications
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
GOChase-II: correcting semantic inconsistencies from Gene Ontology-based annotations for gene products
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Benchmarking ontologies: bigger or better?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Logical development of the cell ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Identifying informative subsets of the Gene Ontology with information bottleneck methods
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Cross-product extensions of the Gene Ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Ontology engineering
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
OnEX: Exploring changes in life science ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Semantic similarity in biomedical ontologies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Ontology quality assurance through analysis of term transformations
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Relationship auditing of the FMA ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
The NCI Thesaurus quality assurance life cycle
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Practical experience with the maintenance and auditing of a large medical ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Applying evolutionary terminology auditing to the Gene Ontology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
The caBIG terminology review process
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Metrics for GO based protein semantic similarity: a systematic evaluation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Monitoring the evolutionary aspect of the Gene Ontology to enhance predictability and usability
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Bio-ontologies: current trends and future directions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Quality control for terms and definitions in ontologies and taxonomies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Ontological analysis of gene expression data: current tools, limitations, and open problems
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Gene ontology: tool for the unification of biology
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
Auditing the Unified Medical Language System with semantic methods
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3795689
retrieved
8 July 2018
OBO and OWL: Leveraging Semantic Web Technologies for the Life Sciences
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0075993
retrieved
21 January 2018
A short study on the success of the Gene Ontology
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0075993
retrieved
21 January 2018
Identifiers
DOI
10.1371/JOURNAL.PONE.0075993
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
ADS bibcode
2013PLoSO...875993D
0 references
PMC publication ID
3795689
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
PubMed publication ID
24146805
1 reference
stated in
Europe PubMed Central
PMC publication ID
3795689
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24146805%20AND%20SRC:MED&resulttype=core&format=json
retrieved
28 February 2020
ResearchGate publication ID
258066110
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit