(Q35023866)

5 August 2017

title

Quantifying the kinetic paths of flexible biomolecular recognition (English)

1 reference

5 August 2017

Jin Wang

1

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5 August 2017

Kun Zhang

series ordinal

2

1 reference

5 August 2017

Hongyang Lu

series ordinal

3

1 reference

5 August 2017

Erkang Wang

series ordinal

4

1 reference

5 August 2017

language of work or name

English

0 references

publication date

14 April 2006

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5 August 2017

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5 August 2017

volume

91

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5 August 2017

issue

3

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5 August 2017

page(s)

866-872

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Application of a Theory of Enzyme Specificity to Protein Synthesis

5 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Protein topology determines binding mechanism

8 July 2018

1 reference

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The unfolding story of three-dimensional domain swapping.

8 July 2018

1 reference

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Physical constraints and functional characteristics of transcription factor-DNA interaction.

8 July 2018

1 reference

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How common is the funnel-like energy landscape in protein-protein interactions?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Speeding molecular recognition by using the folding funnel: the fly-casting mechanism

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Folding funnels, binding funnels, and protein function

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Protein folding via binding and vice versa

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

A mean field model of ligand-protein interactions: implications for the structural assessment of human immunodeficiency virus type 1 protease complexes and receptor-specific binding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Structure-based inhibitors of HIV-1 protease

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Applications of combinatorial technologies to drug discovery. 1. Background and peptide combinatorial libraries

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Flexible ligand docking using a genetic algorithm.

8 July 2018

1 reference

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A hot spot of binding energy in a hormone-receptor interface

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Conformational substates in proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

The Energy Landscapes and Motions of Proteins

8 July 2018

1 reference

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Optimal protein-folding codes from spin-glass theory

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

A survey of flexible protein binding mechanisms and their transition states using native topology based energy landscapes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Temperature dependence of the distribution of the first passage time: results from discontinuous molecular dynamics simulations of an all-atom model of the second beta-hairpin fragment of protein G.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

The physics and bioinformatics of binding and folding-an energy landscape perspective

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Global analysis of the effects of temperature and denaturant on the folding and unfolding kinetics of the N-terminal domain of the protein L9.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Theory of biomolecular recognition

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1563758

Diffusion dynamics, moments, and distribution of first-passage time on the protein-folding energy landscape, with applications to single molecules

25 October 2018

1 reference

12 December 2020

Quantifying biological specificity: the statistical mechanics of molecular recognition

1 reference

12 December 2020

Energy landscape theory, funnels, specificity, and optimal criterion of biomolecular binding

1 reference

12 December 2020

A folded monomeric intermediate in the formation of lambda Cro dimer-DNA complexes

1 reference

12 December 2020

Towards a consistent modeling of protein thermodynamic and kinetic cooperativity: how applicable is the transition state picture to folding and unfolding?

1 reference

12 December 2020

The barriers in the bimolecular and unimolecular folding reactions of the dimeric core domain of Escherichia coli Trp repressor are dominated by enthalpic contributions

1 reference

12 December 2020

Energetic Components of Cooperative Protein Folding

1 reference

12 December 2020

1 reference

12 December 2020

10.1529/BIOPHYSJ.105.074716

Identifiers

DOI

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5 August 2017

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5 August 2017

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