(Q35033920)

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Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential

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scholarly article

1 reference

Europe PubMed Central

5 August 2017

Computational and experimental analysis of microsatellites in rice (Oryza sativa L.): frequency, length variation, transposon associations, and genetic marker potential (English)

1 reference

Europe PubMed Central

5 August 2017

0 references

1 reference

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inferred from title

author name string

S Temnykh

1

1 reference

Europe PubMed Central

5 August 2017

G DeClerck

2

1 reference

Europe PubMed Central

5 August 2017

A Lukashova

3

1 reference

Europe PubMed Central

5 August 2017

L Lipovich

4

1 reference

Europe PubMed Central

5 August 2017

S Cartinhour

5

1 reference

Europe PubMed Central

5 August 2017

S McCouch

6

1 reference

Europe PubMed Central

5 August 2017

publication date

1 August 2001

1 reference

Europe PubMed Central

5 August 2017

Genome Research

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Europe PubMed Central

5 August 2017

11

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Europe PubMed Central

5 August 2017

1441-1452

1 reference

Europe PubMed Central

5 August 2017

8

1 reference

Europe PubMed Central

5 August 2017

Computational and experimental characterization of physically clustered simple sequence repeats in plants

1 reference

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8 July 2018

Rice transposable elements: a survey of 73,000 sequence-tagged-connectors

1 reference

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Fourteen and counting: unraveling trinucleotide repeat diseases

1 reference

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Trinucleotide repeats are clustered in regulatory genes in Saccharomyces cerevisiae.

1 reference

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1 reference

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The distribution and copy number of copia-like retrotransposons in rice (Oryza sativa L.) and their implications in the organization and evolution of the rice genome

1 reference

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Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley

1 reference

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Identification of trait-improving quantitative trait loci alleles from a wild rice relative, Oryza rufipogon

1 reference

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1 reference

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SeqHelp: a program to analyze molecular sequences utilizing common computational resources

1 reference

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A high-density rice genetic linkage map with 2275 markers using a single F2 population.

1 reference

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8 July 2018

Retrotransposons of rice: their regulation and use for genome analysis

1 reference

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8 July 2018

Comparative evaluation of within-cultivar variation of rice (Oryza sativa L.) using microsatellite and RFLP markers.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Low frequency of microsatellites in the avian genome

1 reference

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8 July 2018

A conserved repetitive DNA element located in the centromeres of cereal chromosomes

1 reference

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8 July 2018

A cereal centromeric sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice (Oryza sativa L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Maize simple repetitive DNA sequences: abundance and allele variation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Genome and chromosome identification in cultivated barley and related species of the Triticeae (Poaceae) by in situ hybridization with the GAA-satellite sequence.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

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The physical and genomic organization of microsatellites in sugar beet.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

A computer-based systematic survey reveals the predominance of small inverted-repeat elements in wild-type rice genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

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Alu repeats: a source for the genesis of primate microsatellites.

1 reference

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8 July 2018

Stowaway: a new family of inverted repeat elements associated with the genes of both monocotyledonous and dicotyledonous plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Abundance, polymorphism and genetic mapping of microsatellites in rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Saturated molecular map of the rice genome based on an interspecific backcross population

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Mechanisms of DNA expansion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Basic local alignment search tool

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Characterization of a plant SINE, p-SINE1, in rice genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

8 July 2018

Comparative analysis of microsatellite DNA polymorphism in landraces and cultivars of rice

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=311097

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Evolution of Microsatellites in the Yeast Saccharomyces cerevisiae: Role of Length and Number of Repeated Units

1 reference

https://pubmed.ncbi.nlm.nih.gov/11483586

12 December 2020

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Informativeness of human (dC-dA)n.(dG-dT)n polymorphisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/11483586

12 December 2020

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inferred from PubMed ID database lookup

Microsatellite DNA markers for rice chromosomes

1 reference

https://pubmed.ncbi.nlm.nih.gov/11483586

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Simple repetitive DNA sequences from primates: compilation and analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/11483586

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Compositional properties of homologous coding sequences from plants

1 reference

https://pubmed.ncbi.nlm.nih.gov/11483586

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1101/GR.184001

1 reference

Europe PubMed Central

5 August 2017

1 reference

Europe PubMed Central

5 August 2017

1 reference

Europe PubMed Central

5 August 2017

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