(Q35039886)

5 August 2017

title

Predicting sites of ADAR editing in double-stranded RNA. (English)

1 reference

5 August 2017

Julie M Eggington

1

1 reference

5 August 2017

Tom Greene

series ordinal

2

1 reference

5 August 2017

Brenda L Bass

series ordinal

3

1 reference

5 August 2017

language of work or name

English

0 references

publication date

1 January 2011

1 reference

5 August 2017

published in

Nature Communications

1 reference

5 August 2017

volume

2

1 reference

5 August 2017

page(s)

319

1 reference

Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

5 August 2017

copyright license

start time

17 May 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1038/ncomms1324

0 references

cites work

The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

ADAR editing in double-stranded UTRs and other noncoding RNA sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Functions and regulation of RNA editing by ADAR deaminases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

A-to-I RNA editing and cancer: from pathology to basic science

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Specificity of ADAR-mediated RNA editing in newly identified targets

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Predicting ultraviolet spectrum of single stranded and double stranded deoxyribonucleic acids

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Large-scale overexpression and purification of ADARs from Saccharomyces cerevisiae for biophysical and biochemical studies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

How does RNA editing affect dsRNA-mediated gene silencing?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Redirection of silencing targets by adenosine-to-inosine editing of miRNAs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Editor meets silencer: crosstalk between RNA editing and RNA interference

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Two Sample Logo: a graphical representation of the differences between two sets of sequence alignments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Structure and specific RNA binding of ADAR2 double-stranded RNA binding motifs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Inositol hexakisphosphate is bound in the ADAR2 core and required for RNA editing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Evidence for auto-inhibition by the N terminus of hADAR2 and activation by dsRNA binding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Systematic identification of abundant A-to-I editing sites in the human transcriptome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Altered RNA editing of serotonin 5-HT2C receptor induced by interferon: implications for depression associated with cytokine therapy

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Evidence that RNA editing modulates splice site selection in the 5-HT2C receptor gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Liver Disintegration in the Mouse Embryo Caused by Deficiency in the RNA-editing Enzyme ADAR1

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Fluorescent dye terminator sequencing methods for quantitative determination of replication fitness of human immunodeficiency virus type 1 containing the codon 74 and 184 mutations in reverse transcriptase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Mfold web server for nucleic acid folding and hybridization prediction

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

RNA editing by adenosine deaminases that act on RNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Altered editing of serotonin 2C receptor pre-mRNA in the prefrontal cortex of depressed suicide victims

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Substrate recognition by ADAR1 and ADAR2

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Human RNA-specific adenosine deaminase ADAR1 transcripts possess alternative exon 1 structures that initiate from different promoters, one constitutively active and the other interferon inducible

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

A minor fraction of basic fibroblast growth factor mRNA is deaminated in Xenopus stage VI and matured oocytes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

RNA editing and hypermutation by adenosine deamination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Regulation of serotonin-2C receptor G-protein coupling by RNA editing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Preferential selection of adenosines for modification by double-stranded RNA adenosine deaminase.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

8 July 2018

DNA supercoiling in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

A-to-I pre-mRNA editing of the serotonin 2C receptor: comparisons among inbred mouse strains.

8 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS1324

Early life stress alters adult serotonin 2C receptor pre-mRNA editing and expression of the alpha subunit of the heterotrimeric G-protein G q.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS1324

The binding selectivity of ADAR2's dsRBMs contributes to RNA-editing selectivity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS1324

Purification and Assay of ADAR Activity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS1324

The role of RNA editing by ADARs in RNAi

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS1324

A developmentally regulated activity that unwinds RNA duplexes

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNCOMMS1324

Purification of the Xenopus laevis double-stranded RNA adenosine deaminase.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113232

Double-stranded RNA adenosine deaminases ADAR1 and ADAR2 have overlapping specificities

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21587236

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The importance of internal loops within RNA substrates of ADAR1

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21587236

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NCOMMS1324

1 reference

5 August 2017

0 references

0 references

1 reference

5 August 2017

1 reference