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CIRI: an efficient and unbiased algorithm for de novo circular RNA identification.
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scholarly article
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stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
title
CIRI: an efficient and unbiased algorithm for de novo circular RNA identification
(English)
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
main subject
RNA sequencing
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inferred from title
author
Fangqing Zhao
series ordinal
3
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Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
author name string
Yuan Gao
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
Jinfeng Wang
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
publication date
13 January 2015
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
published in
Genome Biology
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stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
volume
16
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
page(s)
4
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Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
copyright license
Creative Commons Attribution 4.0 International
start time
13 January 2015
1 reference
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April 2022 Public Data File from Crossref
copyright status
copyrighted
0 references
exact match
https://scigraph.springernature.com/pub.10.1186/preaccept-1554375105143452
0 references
cites work
Expanded identification and characterization of mammalian circular RNAs
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PubMed Central
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Detecting and characterizing circular RNAs
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PubMed Central
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Circular RNA is expressed across the eukaryotic tree of life
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PubMed Central
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A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection
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Cell-type specific features of circular RNA expression
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
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8 July 2018
WEB-based GEne SeT AnaLysis Toolkit (WebGestalt): update 2013
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8 July 2018
Circular RNAs are a large class of animal RNAs with regulatory potency
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8 July 2018
Natural RNA circles function as efficient microRNA sponges
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8 July 2018
Circular RNAs are abundant, conserved, and associated with ALU repeats
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
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8 July 2018
Discovery of hundreds of mirtrons in mouse and human small RNA data
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8 July 2018
Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
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8 July 2018
Transcriptome-wide discovery of circular RNAs in Archaea
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8 July 2018
inGAP-sv: a novel scheme to identify and visualize structural variation from paired end mapping data
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Expression of linear and novel circular forms of an INK4/ARF-associated non-coding RNA correlates with atherosclerosis risk.
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Critical association of ncRNA with introns
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8 July 2018
inGAP: an integrated next-generation genome analysis pipeline
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Group I introns: Moving in new directions
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8 July 2018
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
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Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
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8 July 2018
Genome-wide transcription and the implications for genomic organization
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8 July 2018
Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.
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8 July 2018
Viroids and viroid-host interactions.
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8 July 2018
Two reactions of Haloferax volcanii RNA splicing enzymes: joining of exons and circularization of introns
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
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8 July 2018
Non–coding RNA genes and the modern RNA world
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PubMed Central
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8 July 2018
Circular transcripts of the testis-determining gene Sry in adult mouse testis
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
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8 July 2018
Circular intronic long noncoding RNAs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
retrieved
25 October 2018
Mis-splicing yields circular RNA molecules.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
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25 October 2018
The hepatitis delta (delta) virus possesses a circular RNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4316645
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25 October 2018
Exonucleolytic processing of small nucleolar RNAs from pre-mRNA introns
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25583365
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
RNA takes center stage
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/25583365
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1186/S13059-014-0571-3
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
PMC publication ID
4316645
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
PubMed publication ID
25583365
1 reference
stated in
Europe PubMed Central
PMC publication ID
4316645
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25583365%20AND%20SRC:MED&resulttype=core&format=json
retrieved
27 February 2020
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